logo CaMPDB: Calpain for Modulatory Proteolysis Database

XSB0436 : unnamed protein product [Tetraodon nigroviridis]

[ CaMP Format ]

This entry is computationally expanded from SB0063

* Basic Information

OrganismTetraodon nigroviridis
Protein NamesNot available
Gene NamesNot available
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
CAF97757 N/A N/A N/A N/A N/A N/A N/A

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 871 aa

Average Mass: 95.843 kDa

Monoisotopic Mass: 95.781 kDa

2. Domain Information

Annotated Domains: Not Available.

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Integrin_beta 1. 34541797.59e-237
EGF_2 1. 5435774.80.86
EGF_2 2. 59363017.60.027
EGF_2 3. 63766728.23.3e-05
EGF_2 4. 67670732.81.4e-06
Integrin_B_tail 1. 71780179.41.3e-20
Integrin_b_cyt 1. 825870112.31.6e-30
--- cleavage 864 (inside Integrin_b_cyt 825..870) ---
--- cleavage 862 (inside Integrin_b_cyt 825..870) ---
--- cleavage 851 (inside Integrin_b_cyt 825..870) ---
--- cleavage 844 (inside Integrin_b_cyt 825..870) ---
--- cleavage 850 (inside Integrin_b_cyt 825..870) ---

3. Sequence Information

Fasta Sequence: XSB0436.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

5 [sites]

Cleavage sites (±10aa)

[Site 1] IYKSAVTTVV864-NPKYEGK

Val864 Asn

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Ile855Tyr856Lys857Ser858Ala859Val860Thr861Thr862Val863Val864
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Asn865Pro866Lys867Tyr868Glu869Gly870Lys871---

Sequence conservation (by blast)

[Site 2] NPIYKSAVTT862-VVNPKYEGK

Thr862 Val

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Asn853Pro854Ile855Tyr856Lys857Ser858Ala859Val860Thr861Thr862
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Val863Val864Asn865Pro866Lys867Tyr868Glu869Gly870Lys871-

Sequence conservation (by blast)

[Site 3] EKMNAKWDTG851-ENPIYKSAVT

Gly851 Glu

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Glu842Lys843Met844Asn845Ala846Lys847Trp848Asp849Thr850Gly851
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Glu852Asn853Pro854Ile855Tyr856Lys857Ser858Ala859Val860Thr861

Sequence conservation (by blast)

[Site 4] EFAKFEKEKM844-NAKWDTGENP

Met844 Asn

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Glu835Phe836Ala837Lys838Phe839Glu840Lys841Glu842Lys843Met844
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Asn845Ala846Lys847Trp848Asp849Thr850Gly851Glu852Asn853Pro854

Sequence conservation (by blast)

[Site 5] KEKMNAKWDT850-GENPIYKSAV

Thr850 Gly

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Lys841Glu842Lys843Met844Asn845Ala846Lys847Trp848Asp849Thr850
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Gly851Glu852Asn853Pro854Ile855Tyr856Lys857Ser858Ala859Val860

Sequence conservation (by blast)

* References

None.