logo CaMPDB: Calpain for Modulatory Proteolysis Database

XSB0441 : beta-actin [Seriola quinqueradiata]

[ CaMP Format ]

This entry is computationally expanded from SB0031

* Basic Information

OrganismSeriola quinqueradiata (Japanese amberjack)
Protein Namesbeta-actin
Gene NamesACTB
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
BAD20211 N/A N/A Q6L6Q2 N/A N/A N/A N/A

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 373 aa

Average Mass: 41.476 kDa

Monoisotopic Mass: 41.450 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Actin 1. 1373816.22.1e-242
--- cleavage 35 (inside Actin 1..373) ---

3. Sequence Information

Fasta Sequence: XSB0441.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)

[Site 1] RAVFPSIVGR35-PRHQGVMVGM

Arg35 Pro

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Arg26Ala27Val28Phe29Pro30Ser31Ile32Val33Gly34Arg35
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Pro36Arg37His38Gln39Gly40Val41Met42Val43Gly44Met45

Sequence conservation (by blast)

* References

None.