logo CaMPDB: Calpain for Modulatory Proteolysis Database

XSB0648 : actin [Caenorhabditis elegans]

[ CaMP Format ]

This entry is computationally expanded from SB0031

* Basic Information

OrganismCaenorhabditis elegans
Protein NamesActin-1/3; actin
Gene Namesact3; T04C12.6
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
CAA34719 N/A N/A P10983 N/A N/A N/A cel:T04C12.6

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 375 aa

Average Mass: 41.709 kDa

Monoisotopic Mass: 41.682 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Actin 1. 3375829.12.7e-246
--- cleavage 38 (inside Actin 3..375) ---

3. Sequence Information

Fasta Sequence: XSB0648.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Known Structures in PDB: 1D4X (X-ray; 175 A; A=2-376)

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)

[Site 1] RAVFPSIVGR38-PRHQGVMVGM

Arg38 Pro

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Arg29Ala30Val31Phe32Pro33Ser34Ile35Val36Gly37Arg38
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Pro39Arg40His41Gln42Gly43Val44Met45Val46Gly47Met48

Sequence conservation (by blast)

* References

[PubMed ID: 2795655] Krause M, Wild M, Rosenzweig B, Hirsh D, Wild-type and mutant actin genes in Caenorhabditis elegans. J Mol Biol. 1989 Aug 5;208(3):381-92.