XSB0804 : unnamed protein product [Mus musculus]
[ CaMP Format ]
This entry is computationally expanded from SB0052
* Basic Information
| Organism | Mus musculus (house mouse) |
| Protein Names | Putative uncharacterized protein |
| Gene Names | Spnb1 |
| Gene Locus | Not available |
| GO Function | Not available |
* Information From OMIM
Not Available.
* Structure Information
1. Primary Information
Length: 2329 aa
Average Mass: 268.091 kDa
Monoisotopic Mass: 267.925 kDa
2. Domain Information
Annotated Domains: interpro / pfam / smart / prosite
Computationally Assigned Domains (Pfam+HMMER):
| domain name | begin | end | score | e-value |
|---|---|---|---|---|
| CH 1. | 55 | 158 | 118.2 | 2.7e-32 |
| CH 2. | 174 | 278 | 148.9 | 1.5e-41 |
| Spectrin 1. | 302 | 412 | 69.4 | 1.3e-17 |
| Spectrin 2. | 422 | 526 | 107.3 | 5.2e-29 |
| Spectrin 3. | 528 | 635 | 91.9 | 2.2e-24 |
| Spectrin 4. | 637 | 741 | 126.6 | 8.1e-35 |
| Spectrin 5. | 743 | 846 | 101.2 | 3.4e-27 |
| Spectrin 6. | 848 | 952 | 58.7 | 2.1e-14 |
| Spectrin 7. | 954 | 1059 | 74.6 | 3.7e-19 |
| Spectrin 8. | 1061 | 1166 | 94.8 | 2.9e-25 |
| Spectrin 9. | 1168 | 1272 | 17.1 | 0.0012 |
| Spectrin 10. | 1274 | 1377 | 108.7 | 1.9e-29 |
| Spectrin 11. | 1381 | 1476 | 25.3 | 0.00024 |
| Spectrin 12. | 1478 | 1582 | 75.8 | 1.6e-19 |
| Spectrin 13. | 1584 | 1688 | 89.8 | 9.4e-24 |
| Spectrin 14. | 1690 | 1795 | 115.7 | 1.5e-31 |
| Spectrin 15. | 1797 | 1901 | 85.3 | 2.2e-22 |
| Spectrin 16. | 1903 | 2007 | 100.5 | 5.8e-27 |
| Spectrin 17. | 2009 | 2118 | 27.0 | 7.9e-05 |
| --- cleavage 2061 (inside Spectrin 2009..2118) --- | ||||
| PH 1. | 2180 | 2289 | 75.1 | 2.5e-19 |
3. Sequence Information
Fasta Sequence: XSB0804.fasta
Amino Acid Sequence and Secondary Structures (PsiPred):
4. 3D Information
Not Available.
* Cleavage Information
1 [sites]
Cleavage sites (±10aa)
[Site 1] EAFEKSTASW2061-AERFAALEKP
Trp2061 
Ala
 |
|||||||||
| P10 | P9 | P8 | P7 | P6 | P5 | P4 | P3 | P2 | P1 |
|---|---|---|---|---|---|---|---|---|---|
| Glu2052 | Ala2053 | Phe2054 | Glu2055 | Lys2056 | Ser2057 | Thr2058 | Ala2059 | Ser2060 | Trp2061 |
 |
|||||||||
| P1' | P2' | P3' | P4' | P5' | P6' | P7' | P8' | P9' | P10' |
| Ala2062 | Glu2063 | Arg2064 | Phe2065 | Ala2066 | Ala2067 | Leu2068 | Glu2069 | Lys2070 | Pro2071 |
Sequence conservation (by blast)
Sequence conservation (by blast)
| Reference peptide (cleaved bond±30 residues) |
|---|
| LASRDFGHTVDSVEKLIKRHEAFEKSTASWAERFAALEKPTTLELKERQTPERPTEEPGP |
Summary
| # | organism | max score | hits | top seq |
|---|---|---|---|---|
| 1 | Mus musculus | 94.00 | 47 | mKIAA4219 protein |
| 2 | Homo sapiens | 91.30 | 61 | spectrin, beta, erythrocytic (includes spherocytos |
| 3 | N/A | 91.30 | 15 | - |
| 4 | Danio rerio | 72.40 | 9 | spectrin, beta, erythrocytic |
| 5 | Gallus gallus | 70.50 | 6 | PREDICTED: similar to spectrin, beta, non-erythroc |
| 6 | Canis familiaris | 69.30 | 19 | PREDICTED: similar to Spectrin beta chain, brain 1 |
| 7 | Pan troglodytes | 69.30 | 14 | PREDICTED: similar to beta-spectrin isoform 1 |
| 8 | Rattus norvegicus | 69.30 | 13 | spectrin beta 2 |
| 9 | Macaca mulatta | 69.30 | 5 | PREDICTED: spectrin, beta, non-erythrocytic 1 isof |
| 10 | Bos taurus | 69.30 | 5 | PREDICTED: similar to spectrin, beta, non-erythroc |
| 11 | Macaca fascicularis | 69.30 | 2 | unnamed protein product |
| 12 | mice, brain, Peptide Partial, 332 aa | 69.30 | 1 | beta-spectrin subunit |
| 13 | Tetraodon nigroviridis | 63.90 | 8 | unnamed protein product |
| 14 | Drosophila melanogaster | 63.20 | 8 | beta Spectrin CG5870-PA |
| 15 | Aedes aegypti | 63.20 | 3 | beta chain spectrin |
| 16 | Drosophila pseudoobscura | 63.20 | 3 | GA19192-PA |
| 17 | Anopheles gambiae str. PEST | 63.20 | 3 | ENSANGP00000012507 |
| 18 | Tribolium castaneum | 62.00 | 4 | PREDICTED: similar to Spectrin beta chain isoform |
| 19 | Apis mellifera | 62.00 | 3 | PREDICTED: similar to Spectrin beta chain |
| 20 | Strongylocentrotus purpuratus | 57.80 | 5 | PREDICTED: similar to spectrin beta 2 |
| 21 | Caenorhabditis briggsae | 55.10 | 2 | Hypothetical protein CBG19038 |
| 22 | Brugia malayi | 53.90 | 1 | beta-G spectrin |
| 23 | Caenorhabditis elegans | 53.50 | 5 | UNCoordinated family member (unc-70) |
| 24 | Sus scrofa | 41.60 | 1 | spectrin alpha non-erythrocytic 1 |
| 25 | Monodelphis domestica | 35.80 | 4 | PREDICTED: similar to spectrin, beta, erythrocytic |
| 26 | Mus sp. | 34.70 | 1 | SPTB1_MOUSE Spectrin beta chain, erythrocyte (Beta |
| 27 | Xenopus tropicalis | 32.30 | 1 | hypothetical protein LOC100036647 |
Top-ranked sequences
| organism | matching |
|---|---|
| Mus musculus | Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTTLELK 2077 ||||||||||||||||||||||||||||||#|||||||||||||||| Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTTLELK 2077 |
| Homo sapiens | Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTTLELK 2077 ||| ||||||||||||||||||||||||||#|||||||||||||||| Sbjct 1404 LASGDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTTLELK 1449 |
| N/A | Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTTLELK 2077 ||| ||||||||||||||||||||||||||#|||||||||||||||| Sbjct 978 LASGDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTTLELK 1023 |
| Danio rerio | Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTTLEL 2076 +||+| | ||| ||||+|||||||||||+|# |||+|||+ ||||| Sbjct 2051 VASKDVGQTVDEVEKLLKRHEAFEKSTATW#EERFSALERLTTLEL 2095 |
| Gallus gallus | Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTTLEL 2076 |+||+ | +|| |||||||||||||| |+|# |||||||+ ||||| Sbjct 2039 LSSREIGQSVDEVEKLIKRHEAFEKSAATW#DERFAALERLTTLEL 2083 |
| Canis familiaris | Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTTLEL 2076 |+||+ | +|| |||||||||||||| |+|# |||+|||+ ||||| Sbjct 2040 LSSREIGQSVDEVEKLIKRHEAFEKSAATW#DERFSALERLTTLEL 2084 |
| Pan troglodytes | Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTTLEL 2076 |+||+ | +|| |||||||||||||| |+|# |||+|||+ ||||| Sbjct 2040 LSSREIGQSVDEVEKLIKRHEAFEKSAATW#DERFSALERLTTLEL 2084 |
| Rattus norvegicus | Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTTLEL 2076 |+||+ | +|| |||||||||||||| |+|# |||+|||+ ||||| Sbjct 2035 LSSREIGQSVDEVEKLIKRHEAFEKSAATW#DERFSALERLTTLEL 2079 |
| Macaca mulatta | Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTTLEL 2076 |+||+ | +|| |||||||||||||| |+|# |||+|||+ ||||| Sbjct 2027 LSSREIGQSVDEVEKLIKRHEAFEKSAATW#DERFSALERLTTLEL 2071 |
| Bos taurus | Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTTLEL 2076 |+||+ | +|| |||||||||||||| |+|# |||+|||+ ||||| Sbjct 2039 LSSREIGQSVDEVEKLIKRHEAFEKSAATW#DERFSALERLTTLEL 2083 |
| Macaca fascicularis | Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTTLEL 2076 |+||+ | +|| |||||||||||||| |+|# |||+|||+ ||||| Sbjct 370 LSSREIGQSVDEVEKLIKRHEAFEKSAATW#DERFSALERLTTLEL 414 |
| mice, brain, Peptide Partial, 332 aa | Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTTLEL 2076 |+||+ | +|| |||||||||||||| |+|# |||+|||+ ||||| Sbjct 166 LSSREIGQSVDEVEKLIKRHEAFEKSAATW#DERFSALERLTTLEL 210 |
| Tetraodon nigroviridis | Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTTL 2074 |+||+ | +|| ||||+||||||||| |+|# |||+|||+ ||+ Sbjct 1940 LSSREVGRSVDQVEKLLKRHEAFEKSAATW#EERFSALERLTTV 1982 |
| Drosophila melanogaster | Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTTLELK 2077 | | + |||+| || |||+||||||| |+ # |||+|||+ || ||| Sbjct 2041 LLSSELGHTIDEVENLIKKHEAFEKSAAAQ#EERFSALERLTTFELK 2086 |
| Aedes aegypti | Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTTLELK 2077 | | + |||+| || |||+||||||| |+ # |||+|||+ || ||| Sbjct 2041 LMSTELGHTIDEVENLIKKHEAFEKSAAAQ#EERFSALERLTTFELK 2086 |
| Drosophila pseudoobscura | Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTTLELK 2077 | | + |||+| || |||+||||||| |+ # |||+|||+ || ||| Sbjct 2041 LLSSELGHTIDEVENLIKKHEAFEKSAAAQ#EERFSALERLTTFELK 2086 |
| Anopheles gambiae str. PEST | Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTTLELK 2077 | | + |||+| || |||+||||||| |+ # |||+|||+ || ||| Sbjct 2041 LMSTELGHTIDEVENLIKKHEAFEKSAAAQ#EERFSALERLTTFELK 2086 |
| Tribolium castaneum | Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTTLELK 2077 | | + |||+| || |||+||||||| |+ # |||+|||+ || ||+ Sbjct 2040 LMSTELGHTIDDVENLIKKHEAFEKSAAAQ#EERFSALERLTTFELR 2085 |
| Apis mellifera | Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTTLELK 2077 | |++ |||+| || |||+||||||| |+ # |||+|| + || ||| Sbjct 2039 LMSQELGHTIDEVENLIKKHEAFEKSAAAQ#EERFSALHRLTTFELK 2084 |
| Strongylocentrotus purpuratus | Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTTLELK 2077 | | |+| ++| |||||||||||||+ # ||| |||| || ||+ Sbjct 2029 LRSDDYGDSLDEVEKLIKRHEAFEKALYCQ#EERFTALEKLTTFELR 2074 |
| Caenorhabditis briggsae | Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTTLELK 2077 | ||++| ++ ||||+||||||| + # ||| |||| || ||| Sbjct 2027 LISREYGRNLEETIKLIKKHEAFEKSALAQ#EERFLALEKLTTFELK 2072 |
| Brugia malayi | Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTTLELK 2077 | |+++| ++ ||||+||||||| + # ||| |||| || ||| Sbjct 2036 LVSKEYGRNLEETIKLIKKHEAFEKSANAQ#EERFLALEKLTTFELK 2081 |
| Caenorhabditis elegans | Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTTLELK 2077 | |+++| ++ ||||+||||||| + # ||| |||| || ||| Sbjct 2030 LISKEYGRNLEETIKLIKKHEAFEKSAFAQ#EERFLALEKLTTFELK 2075 |
| Sus scrofa | Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTT 2073 | + | | ++|||| |+|+|| |||| ++ # |+ ||++ | Sbjct 27 LLNEDLGDSLDSVEALLKKHEDFEKSLSAQ#EEKITALDEFVT 68 |
| Monodelphis domestica | Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTTLELK 2077 |||||||||||||||||||||||||||| |#|||||||||||||||| Sbjct 2028 LASRDFGHTVDSVEKLIKRHEAFEKSTAPW#AERFAALEKPTTLELK 2073 Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALE 2069 +| +||+ + +|| |+||| | ||++# || ||| Sbjct 444 VAQDNFGYDLAAVEAAKKKHEAIETDTAAY#EERVKALE 481 |
| Mus sp. | Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTTLELK 2077 ||||||||||||||||||||||||||||||#|||||||||||||||| Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTTLELK 2077 Query 2036 DFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALE 2069 +||+ + +|| |+||| | ||++# || ||| Sbjct 441 NFGYDLAAVEAAKKKHEAIETDTAAY#EERVKALE 474 |
| Xenopus tropicalis | Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALEKPTT 2073 | + | | ++|||| |+|+|| |||| ++ # |+ ||++ | Sbjct 490 LLNEDLGDSLDSVEALLKKHEDFEKSLSAQ#EEKITALDEFAT 531 Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAALE 2069 | | | | ++|||| |||+|| |+|+ # |+ |||+ Sbjct 1467 LNSEDKGDSLDSVEALIKKHEDFDKAINVQ#EEKIAALQ 1504 Query 2032 LASRDFGHTVDSVEKLIKRHEAFEKSTASW#AERFAAL 2068 +|| ||| + ||+ |+++|| |+ |+ # |+ || Sbjct 278 MASDDFGRDLASVQALLRKHEGLERDLAAL#EEKVKAL 314 Query 2032 LASRDFGHTVDSVEKLIKRHEAFE 2055 +|| |+| |+ +++ |+|+||||| Sbjct 1892 VASEDYGDTLAAIQGLLKKHEAFE 1915 |
* References
[PubMed ID: 10349636] Carninci P, Hayashizaki Y, High-efficiency full-length cDNA cloning. Methods Enzymol. 1999;303:19-44.
[PubMed ID: 11042159] ... Carninci P, Shibata Y, Hayatsu N, Sugahara Y, Shibata K, Itoh M, Konno H, Okazaki Y, Muramatsu M, Hayashizaki Y, Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Genome Res. 2000 Oct;10(10):1617-30.
[PubMed ID: 11076861] ... Shibata K, Itoh M, Aizawa K, Nagaoka S, Sasaki N, Carninci P, Konno H, Akiyama J, Nishi K, Kitsunai T, Tashiro H, Itoh M, Sumi N, Ishii Y, Nakamura S, Hazama M, Nishine T, Harada A, Yamamoto R, Matsumoto H, Sakaguchi S, Ikegami T, Kashiwagi K, Fujiwake S, Inoue K, Togawa Y, RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Genome Res. 2000 Nov;10(11):1757-71.
[PubMed ID: 11217851] ... Kawai J, Shinagawa A, Shibata K, Yoshino M, Itoh M, Ishii Y, Arakawa T, Hara A, Fukunishi Y, Konno H, Adachi J, Fukuda S, Aizawa K, Izawa M, Nishi K, Kiyosawa H, Kondo S, Yamanaka I, Saito T, Okazaki Y, Gojobori T, Bono H, Kasukawa T, Saito R, Kadota K, Matsuda H, Ashburner M, Batalov S, Casavant T, Fleischmann W, Gaasterland T, Gissi C, King B, Kochiwa H, Kuehl P, Lewis S, Matsuo Y, Nikaido I, Pesole G, Quackenbush J, Schriml LM, Staubli F, Suzuki R, Tomita M, Wagner L, Washio T, Sakai K, Okido T, Furuno M, Aono H, Baldarelli R, Barsh G, Blake J, Boffelli D, Bojunga N, Carninci P, de Bonaldo MF, Brownstein MJ, Bult C, Fletcher C, Fujita M, Gariboldi M, Gustincich S, Hill D, Hofmann M, Hume DA, Kamiya M, Lee NH, Lyons P, Marchionni L, Mashima J, Mazzarelli J, Mombaerts P, Nordone P, Ring B, Ringwald M, Rodriguez I, Sakamoto N, Sasaki H, Sato K, Schonbach C, Seya T, Shibata Y, Storch KF, Suzuki H, Toyo-oka K, Wang KH, Weitz C, Whittaker C, Wilming L, Wynshaw-Boris A, Yoshida K, Hasegawa Y, Kawaji H, Kohtsuki S, Hayashizaki Y, Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90.
[PubMed ID: 12466851] ... Okazaki Y, Furuno M, Kasukawa T, Adachi J, Bono H, Kondo S, Nikaido I, Osato N, Saito R, Suzuki H, Yamanaka I, Kiyosawa H, Yagi K, Tomaru Y, Hasegawa Y, Nogami A, Schonbach C, Gojobori T, Baldarelli R, Hill DP, Bult C, Hume DA, Quackenbush J, Schriml LM, Kanapin A, Matsuda H, Batalov S, Beisel KW, Blake JA, Bradt D, Brusic V, Chothia C, Corbani LE, Cousins S, Dalla E, Dragani TA, Fletcher CF, Forrest A, Frazer KS, Gaasterland T, Gariboldi M, Gissi C, Godzik A, Gough J, Grimmond S, Gustincich S, Hirokawa N, Jackson IJ, Jarvis ED, Kanai A, Kawaji H, Kawasawa Y, Kedzierski RM, King BL, Konagaya A, Kurochkin IV, Lee Y, Lenhard B, Lyons PA, Maglott DR, Maltais L, Marchionni L, McKenzie L, Miki H, Nagashima T, Numata K, Okido T, Pavan WJ, Pertea G, Pesole G, Petrovsky N, Pillai R, Pontius JU, Qi D, Ramachandran S, Ravasi T, Reed JC, Reed DJ, Reid J, Ring BZ, Ringwald M, Sandelin A, Schneider C, Semple CA, Setou M, Shimada K, Sultana R, Takenaka Y, Taylor MS, Teasdale RD, Tomita M, Verardo R, Wagner L, Wahlestedt C, Wang Y, Watanabe Y, Wells C, Wilming LG, Wynshaw-Boris A, Yanagisawa M, Yang I, Yang L, Yuan Z, Zavolan M, Zhu Y, Zimmer A, Carninci P, Hayatsu N, Hirozane-Kishikawa T, Konno H, Nakamura M, Sakazume N, Sato K, Shiraki T, Waki K, Kawai J, Aizawa K, Arakawa T, Fukuda S, Hara A, Hashizume W, Imotani K, Ishii Y, Itoh M, Kagawa I, Miyazaki A, Sakai K, Sasaki D, Shibata K, Shinagawa A, Yasunishi A, Yoshino M, Waterston R, Lander ES, Rogers J, Birney E, Hayashizaki Y, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002 Dec 5;420(6915):563-73.
[PubMed ID: 16141072] ... Carninci P, Kasukawa T, Katayama S, Gough J, Frith MC, Maeda N, Oyama R, Ravasi T, Lenhard B, Wells C, Kodzius R, Shimokawa K, Bajic VB, Brenner SE, Batalov S, Forrest AR, Zavolan M, Davis MJ, Wilming LG, Aidinis V, Allen JE, Ambesi-Impiombato A, Apweiler R, Aturaliya RN, Bailey TL, Bansal M, Baxter L, Beisel KW, Bersano T, Bono H, Chalk AM, Chiu KP, Choudhary V, Christoffels A, Clutterbuck DR, Crowe ML, Dalla E, Dalrymple BP, de Bono B, Della Gatta G, di Bernardo D, Down T, Engstrom P, Fagiolini M, Faulkner G, Fletcher CF, Fukushima T, Furuno M, Futaki S, Gariboldi M, Georgii-Hemming P, Gingeras TR, Gojobori T, Green RE, Gustincich S, Harbers M, Hayashi Y, Hensch TK, Hirokawa N, Hill D, Huminiecki L, Iacono M, Ikeo K, Iwama A, Ishikawa T, Jakt M, Kanapin A, Katoh M, Kawasawa Y, Kelso J, Kitamura H, Kitano H, Kollias G, Krishnan SP, Kruger A, Kummerfeld SK, Kurochkin IV, Lareau LF, Lazarevic D, Lipovich L, Liu J, Liuni S, McWilliam S, Madan Babu M, Madera M, Marchionni L, Matsuda H, Matsuzawa S, Miki H, Mignone F, Miyake S, Morris K, Mottagui-Tabar S, Mulder N, Nakano N, Nakauchi H, Ng P, Nilsson R, Nishiguchi S, Nishikawa S, Nori F, Ohara O, Okazaki Y, Orlando V, Pang KC, Pavan WJ, Pavesi G, Pesole G, Petrovsky N, Piazza S, Reed J, Reid JF, Ring BZ, Ringwald M, Rost B, Ruan Y, Salzberg SL, Sandelin A, Schneider C, Schonbach C, Sekiguchi K, Semple CA, Seno S, Sessa L, Sheng Y, Shibata Y, Shimada H, Shimada K, Silva D, Sinclair B, Sperling S, Stupka E, Sugiura K, Sultana R, Takenaka Y, Taki K, Tammoja K, Tan SL, Tang S, Taylor MS, Tegner J, Teichmann SA, Ueda HR, van Nimwegen E, Verardo R, Wei CL, Yagi K, Yamanishi H, Zabarovsky E, Zhu S, Zimmer A, Hide W, Bult C, Grimmond SM, Teasdale RD, Liu ET, Brusic V, Quackenbush J, Wahlestedt C, Mattick JS, Hume DA, Kai C, Sasaki D, Tomaru Y, Fukuda S, Kanamori-Katayama M, Suzuki M, Aoki J, Arakawa T, Iida J, Imamura K, Itoh M, Kato T, Kawaji H, Kawagashira N, Kawashima T, Kojima M, Kondo S, Konno H, Nakano K, Ninomiya N, Nishio T, Okada M, Plessy C, Shibata K, Shiraki T, Suzuki S, Tagami M, Waki K, Watahiki A, Okamura-Oho Y, Suzuki H, Kawai J, Hayashizaki Y, The transcriptional landscape of the mammalian genome. Science. 2005 Sep 2;309(5740):1559-63.
[PubMed ID: 16141073] ... Katayama S, Tomaru Y, Kasukawa T, Waki K, Nakanishi M, Nakamura M, Nishida H, Yap CC, Suzuki M, Kawai J, Suzuki H, Carninci P, Hayashizaki Y, Wells C, Frith M, Ravasi T, Pang KC, Hallinan J, Mattick J, Hume DA, Lipovich L, Batalov S, Engstrom PG, Mizuno Y, Faghihi MA, Sandelin A, Chalk AM, Mottagui-Tabar S, Liang Z, Lenhard B, Wahlestedt C, Antisense transcription in the mammalian transcriptome. Science. 2005 Sep 2;309(5740):1564-6.