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XSB1013 : phosphodiesterase 1A [Bos taurus]

[ CaMP Format ]

This entry is computationally expanded from SB0004

* Basic Information

OrganismBos taurus (cattle)
Protein NamesCalcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A; Cam-PDE 1A; 3.1.4.17; 61 kDa Cam-PDE; phosphodiesterase 1A; calmodulin-dependent phosphodiesterase type 1; nucleotide phosphodiesterase; 3'-5'-cyclic
Gene NamesPDE1A; phosphodiesterase 1A, calmodulin-dependent
Gene Locus2; chromosome 2
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
NP_776839 NM_174414 281969 P14100 N/A N/A N/A bta:281969

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 514 aa

Average Mass: 59.198 kDa

Monoisotopic Mass: 59.160 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
PDEase_I_N 1. 57117125.81.4e-34
--- cleavage 110 (inside PDEase_I_N 57..117) ---
PDEase_I 1. 202433512.36.3e-151

3. Sequence Information

Fasta Sequence: XSB1013.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)

[Site 1] RFRSIVHVVQ110-AGIFVERMYR

Gln110 Ala

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Arg101Phe102Arg103Ser104Ile105Val106His107Val108Val109Gln110
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Ala111Gly112Ile113Phe114Val115Glu116Arg117Met118Tyr119Arg120

Sequence conservation (by blast)

* References

[PubMed ID: 17467927] Das SB, Dinh C, Shah S, Olson D, Ross A, Selvakumar P, Sharma RK, Calmodulin-dependent cyclic nucleotide phosphodiesterase (PDE1) splice variants from bovine cardiac muscle. Gene. 2007 Jul 15;396(2):283-92. Epub 2007 Mar 30.

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