logo CaMPDB: Calpain for Modulatory Proteolysis Database

XSB1038 : PREDICTED: hypothetical protein [Pan troglodytes]

[ CaMP Format ]

This entry is computationally expanded from SB0063

* Basic Information

OrganismPan troglodytes (chimpanzee)
Protein Nameshypothetical protein
Gene NamesLOC450396; Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 1593 ESTs, 27 Proteins
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
XP_507735 XM_507735 450396 N/A N/A N/A N/A N/A

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 910 aa

Average Mass: 100.277 kDa

Monoisotopic Mass: 100.211 kDa

2. Domain Information

Annotated Domains: Not Available.

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Integrin_beta 1. 1465761125.60
EGF_2 1. 57861211.80.13
EGF_2 2. 62866521.30.0041
EGF_2 3. 67270221.90.0027
EGF_2 4. 71174233.77.6e-07
Integrin_B_tail 1. 752840159.01.4e-44
Integrin_b_cyt 1. 864909112.31.6e-30
--- cleavage 901 (inside Integrin_b_cyt 864..909) ---
--- cleavage 903 (inside Integrin_b_cyt 864..909) ---
--- cleavage 890 (inside Integrin_b_cyt 864..909) ---
--- cleavage 889 (inside Integrin_b_cyt 864..909) ---

3. Sequence Information

Fasta Sequence: XSB1038.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

4 [sites]

Cleavage sites (±10aa)

[Site 1] NPIYKSAVTT901-VVNPKYEGK

Thr901 Val

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Asn892Pro893Ile894Tyr895Lys896Ser897Ala898Val899Thr900Thr901
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Val902Val903Asn904Pro905Lys906Tyr907Glu908Gly909Lys910-

Sequence conservation (by blast)

[Site 2] IYKSAVTTVV903-NPKYEGK

Val903 Asn

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Ile894Tyr895Lys896Ser897Ala898Val899Thr900Thr901Val902Val903
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Asn904Pro905Lys906Tyr907Glu908Gly909Lys910---

Sequence conservation (by blast)

[Site 3] EKMNAKWDTG890-ENPIYKSAVT

Gly890 Glu

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Glu881Lys882Met883Asn884Ala885Lys886Trp887Asp888Thr889Gly890
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Glu891Asn892Pro893Ile894Tyr895Lys896Ser897Ala898Val899Thr900

Sequence conservation (by blast)

[Site 4] KEKMNAKWDT889-GENPIYKSAV

Thr889 Gly

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Lys880Glu881Lys882Met883Asn884Ala885Lys886Trp887Asp888Thr889
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Gly890Glu891Asn892Pro893Ile894Tyr895Lys896Ser897Ala898Val899

Sequence conservation (by blast)

* References

None.