XSB2342 : rCG53564 [Rattus norvegicus]
[ CaMP Format ]
This entry is computationally expanded from SB0015
* Basic Information
| Organism | Rattus norvegicus (Norway rat) |
| Protein Names | rCG53564 |
| Gene Names | Not available |
| Gene Locus | Not available |
| GO Function | Not available |
| Entrez Protein | Entrez Nucleotide | Entrez Gene | UniProt | OMIM | HGNC | HPRD | KEGG |
|---|---|---|---|---|---|---|---|
| EDM07855 | N/A | N/A | N/A | N/A | N/A | N/A | N/A |
* Information From OMIM
Not Available.
* Structure Information
1. Primary Information
Length: 1120 aa
Average Mass: 124.370 kDa
Monoisotopic Mass: 124.290 kDa
2. Domain Information
Annotated Domains: Not Available.
Computationally Assigned Domains (Pfam+HMMER):
| domain name | begin | end | score | e-value |
|---|---|---|---|---|
| SPRY 1. | 25 | 147 | 63.9 | 5.9e-16 |
| --- cleavage 339 --- | ||||
| SPRY 2. | 369 | 504 | 109.3 | 1.3e-29 |
| PRA-PH 1. | 875 | 948 | -50.8 | 7.2 |
| RYDR_ITPR 1. | 979 | 1120 | 99.4 | 1.2e-26 |
3. Sequence Information
Fasta Sequence: XSB2342.fasta
Amino Acid Sequence and Secondary Structures (PsiPred):
4. 3D Information
Not Available.
* Cleavage Information
1 [sites]
Cleavage sites (±10aa)
[Site 1] FKAKKVAMMT339-QPPSTPALPR
Thr339 
Gln
 |
|||||||||
| P10 | P9 | P8 | P7 | P6 | P5 | P4 | P3 | P2 | P1 |
|---|---|---|---|---|---|---|---|---|---|
| Phe330 | Lys331 | Ala332 | Lys333 | Lys334 | Val335 | Ala336 | Met337 | Met338 | Thr339 |
 |
|||||||||
| P1' | P2' | P3' | P4' | P5' | P6' | P7' | P8' | P9' | P10' |
| Gln340 | Pro341 | Pro342 | Ser343 | Thr344 | Pro345 | Ala346 | Leu347 | Pro348 | Arg349 |
Sequence conservation (by blast)
* References
[PubMed ID: 15632090] Florea L, Di Francesco V, Miller J, Turner R, Yao A, Harris M, Walenz B, Mobarry C, Merkulov GV, Charlab R, Dew I, Deng Z, Istrail S, Li P, Sutton G, Gene and alternative splicing annotation with AIR. Genome Res. 2005 Jan;15(1):54-66.