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XSB2415 : GH20408 [Drosophila grimshawi]

[ CaMP Format ]

This entry is computationally expanded from SB0031

* Basic Information

OrganismDrosophila grimshawi
Protein NamesGH20408; Dgri\GH20408-PA; GH20408-PA
Gene NamesDgri\GH20408; Dgri_GH20408
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
XP_001986647 XM_001986611 6560454 B4J9V0_DROGR N/A N/A N/A dgr:Dgri_GH20408

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 376 aa

Average Mass: 41.808 kDa

Monoisotopic Mass: 41.781 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Actin 1. 3376829.12.7e-246
--- cleavage 38 (inside Actin 3..376) ---

3. Sequence Information

Fasta Sequence: XSB2415.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)

[Site 1] RAVFPSIVGR38-PRHQGVMVGM

Arg38 Pro

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Arg29Ala30Val31Phe32Pro33Ser34Ile35Val36Gly37Arg38
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Pro39Arg40His41Gln42Gly43Val44Met45Val46Gly47Met48

Sequence conservation (by blast)

* References

[PubMed ID: 18057021] Zimin AV, Smith DR, Sutton G, Yorke JA, Assembly reconciliation. Bioinformatics. 2008 Jan 1;24(1):42-5. Epub 2007 Dec 5.

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