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XSB2481 : actin beta [Oncorhynchus mykiss]

[ CaMP Format ]

This entry is computationally expanded from SB0031

* Basic Information

OrganismOncorhynchus mykiss (rainbow trout)
Protein NamesActin beta; Beta-actin
Gene Namesactb; ACTB; actin beta
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
NP_001117707 NM_001124235 100135845 Q70Z26_ONCMY N/A N/A N/A N/A

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 375 aa

Average Mass: 41.783 kDa

Monoisotopic Mass: 41.756 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Actin 1. 2375827.39.5e-246
--- cleavage 37 (inside Actin 2..375) ---

3. Sequence Information

Fasta Sequence: XSB2481.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)

[Site 1] RAVFPSIVGR37-PRHQGVMVGM

Arg37 Pro

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Arg28Ala29Val30Phe31Pro32Ser33Ile34Val35Gly36Arg37
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Pro38Arg39His40Gln41Gly42Val43Met44Val45Gly46Met47

Sequence conservation (by blast)

* References

[PubMed ID: 15721272] Ojima N, Yamashita M, Watabe S, Quantitative mRNA expression profiling of heat-shock protein families in rainbow trout cells. Biochem Biophys Res Commun. 2005 Apr 1;329(1):51-7.

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