logo CaMPDB: Calpain for Modulatory Proteolysis Database

XSB2496 : actin [Filobasidiella depauperata]

[ CaMP Format ]

This entry is computationally expanded from SB0031

* Basic Information

OrganismFilobasidiella depauperata
Protein Namesactin
Gene NamesACT1
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
ACB45442 N/A N/A B9TXN7_9TREE N/A N/A N/A N/A

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 362 aa

Average Mass: 40.304 kDa

Monoisotopic Mass: 40.278 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Actin 1. 2362726.61.9e-215
--- cleavage 37 (inside Actin 2..362) ---

3. Sequence Information

Fasta Sequence: XSB2496.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)

[Site 1] RAVFPSIVGR37-PRHQGVMVGM

Arg37 Pro

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Arg28Ala29Val30Phe31Pro32Ser33Ile34Val35Gly36Arg37
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Pro38Arg39His40Gln41Gly42Val43Met44Val45Gly46Met47

Sequence conservation (by blast)

* References

[PubMed ID: 19517012] Ngamskulrungroj P, Gilgado F, Faganello J, Litvintseva AP, Leal AL, Tsui KM, Mitchell TG, Vainstein MH, Meyer W, Genetic diversity of the Cryptococcus species complex suggests that Cryptococcus gattii deserves to have varieties. PLoS One. 2009 Jun 10;4(6):e5862.