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XSB2512 : actin, gamma 1 [Pan troglodytes]

[ CaMP Format ]

This entry is computationally expanded from SB0031

* Basic Information

OrganismPan troglodytes (chimpanzee)
Protein NamesActin, gamma 1; actin; gamma 1
Gene NamesACTG1; actg1; actin, gamma 1
Gene Locus17; chromosome 17
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
NP_001128241 NM_001134769 746570 A5A6N1_PANTR N/A N/A N/A ptr:746570

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 381 aa

Average Mass: 42.507 kDa

Monoisotopic Mass: 42.479 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Actin 1. 2381684.21.1e-202
--- cleavage 37 (inside Actin 2..381) ---

3. Sequence Information

Fasta Sequence: XSB2512.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)

[Site 1] RAVFPSIVGR37-PRHQGVMVGM

Arg37 Pro

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Arg28Ala29Val30Phe31Pro32Ser33Ile34Val35Gly36Arg37
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Pro38Arg39His40Gln41Gly42Val43Met44Val45Gly46Met47

Sequence conservation (by blast)

* References

[PubMed ID: 17574350] Sakate R, Suto Y, Imanishi T, Tanoue T, Hida M, Hayasaka I, Kusuda J, Gojobori T, Hashimoto K, Hirai M, Mapping of chimpanzee full-length cDNAs onto the human genome unveils large potential divergence of the transcriptome. Gene. 2007 Sep 1;399(1):1-10. Epub 2007 Apr 20.