logo CaMPDB: Calpain for Modulatory Proteolysis Database

XSB2528 : actin [Debaryomyces hansenii var. hansenii]

[ CaMP Format ]

This entry is computationally expanded from SB0031

* Basic Information

OrganismDebaryomyces hansenii var. hansenii
Protein Namesactin
Gene Namesact1
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
CAQ52652 N/A N/A B4F4P7_DEBHA N/A N/A N/A N/A

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 376 aa

Average Mass: 41.791 kDa

Monoisotopic Mass: 41.764 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Actin 1. 3376799.62e-237
--- cleavage 38 (inside Actin 3..376) ---

3. Sequence Information

Fasta Sequence: XSB2528.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)

[Site 1] RAVFPSIVGR38-PRHQGIMVGM

Arg38 Pro

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Arg29Ala30Val31Phe32Pro33Ser34Ile35Val36Gly37Arg38
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Pro39Arg40His41Gln42Gly43Ile44Met45Val46Gly47Met48

Sequence conservation (by blast)

* References

[PubMed ID: 19385997] Nguyen HV, Gaillardin C, Neuveglise C, Differentiation of Debaryomyces hansenii and Candida famata by rRNA gene intergenic spacer fingerprinting and reassessment of phylogenetic relationships among D. hansenii, C. famata, D. fabryi, C. flareri (=D. subglobosus) and D. prosopidis: description of D. vietnamensis sp. nov. closely related to D. nepalensis. FEMS Yeast Res. 2009 Jun;9(4):641-62. Epub 2009 Apr 6.