XSB2614 : vimentin [Cavia porcellus]
[ CaMP Format ]
This entry is computationally expanded from SB0037
* Basic Information
| Organism | Cavia porcellus (domestic guinea pig) |
| Protein Names | vimentin |
| Gene Names | Vim |
| Gene Locus | Not available |
| GO Function | Not available |
| Entrez Protein | Entrez Nucleotide | Entrez Gene | UniProt | OMIM | HGNC | HPRD | KEGG |
|---|---|---|---|---|---|---|---|
| ACF35341 | N/A | N/A | B5A9S3_CAVPO | N/A | N/A | N/A | N/A |
* Information From OMIM
Not Available.
* Structure Information
1. Primary Information
Length: 464 aa
Average Mass: 53.502 kDa
Monoisotopic Mass: 53.469 kDa
2. Domain Information
Annotated Domains: interpro / pfam / smart / prosite
Computationally Assigned Domains (Pfam+HMMER):
| domain name | begin | end | score | e-value |
|---|---|---|---|---|
| Filament_head 1. | 4 | 99 | 114.7 | 3.1e-31 |
| --- cleavage 89 (inside Filament_head 4..99) --- | ||||
| Filament 1. | 100 | 408 | 610.5 | 1.8e-180 |
| --- cleavage 262 (inside Filament 100..408) --- | ||||
3. Sequence Information
Fasta Sequence: XSB2614.fasta
Amino Acid Sequence and Secondary Structures (PsiPred):
4. 3D Information
Not Available.
* Cleavage Information
2 [sites]
Cleavage sites (±10aa)
[Site 1] DSVDFSLADA89-INTEFKNTRT
Ala89 
Ile
 |
|||||||||
| P10 | P9 | P8 | P7 | P6 | P5 | P4 | P3 | P2 | P1 |
|---|---|---|---|---|---|---|---|---|---|
| Asp80 | Ser81 | Val82 | Asp83 | Phe84 | Ser85 | Leu86 | Ala87 | Asp88 | Ala89 |
 |
|||||||||
| P1' | P2' | P3' | P4' | P5' | P6' | P7' | P8' | P9' | P10' |
| Ile90 | Asn91 | Thr92 | Glu93 | Phe94 | Lys95 | Asn96 | Thr97 | Arg98 | Thr99 |
Sequence conservation (by blast)
Sequence conservation (by blast)
| Reference peptide (cleaved bond±30 residues) |
|---|
| VTRSSASRLRSSVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDKV |
Summary
| # | organism | max score | hits | top seq |
|---|---|---|---|---|
| 1 | Mus musculus | 115.00 | 30 | vimentin |
| 2 | N/A | 115.00 | 26 | - |
| 3 | Rattus norvegicus | 114.00 | 10 | vimentin |
| 4 | Homo sapiens | 113.00 | 37 | vimentin variant |
| 5 | Canis familiaris | 113.00 | 20 | PREDICTED: similar to vimentin isoform 10 |
| 6 | Macaca mulatta | 113.00 | 8 | PREDICTED: vimentin |
| 7 | Pan troglodytes | 113.00 | 6 | vimentin |
| 8 | Macaca fascicularis | 113.00 | 5 | VIME_MACFA Vimentin sp |
| 9 | synthetic construct | 113.00 | 3 | vimentin |
| 10 | Pan troglodytes verus | 113.00 | 1 | vimentin |
| 11 | Bos taurus | 112.00 | 11 | vimentin |
| 12 | Ovis aries | 112.00 | 2 | vimentin |
| 13 | Monodelphis domestica | 109.00 | 5 | PREDICTED: similar to vimentin |
| 14 | Gallus gallus | 87.40 | 5 | vimentin |
| 15 | Acipenser baerii | 87.00 | 2 | vimentin |
| 16 | Daboia russellii | 81.30 | 1 | AF447708_1 vimentin |
| 17 | Xenopus tropicalis | 80.90 | 8 | Unknown (protein for IMAGE:7605834) |
| 18 | Xenopus laevis | 80.50 | 21 | Vim1 protein |
| 19 | Oncorhynchus mykiss | 78.20 | 2 | VIME_ONCMY Vimentin emb |
| 20 | Cyprinus carpio | 77.80 | 1 | VIME_CYPCA Vimentin gb |
| 21 | Danio rerio | 75.90 | 21 | vimentin |
| 22 | Protopterus aethiopicus | 73.20 | 2 | type III desmin |
| 23 | Sus scrofa | 70.90 | 3 | desmin |
| 24 | Cricetulus griseus | 70.50 | 1 | vimentin |
| 25 | Tetraodon nigroviridis | 70.10 | 6 | unnamed protein product |
| 26 | Lampetra fluviatilis | 68.90 | 1 | intermediate filament protein type III |
| 27 | Mesocricetus auratus | 68.60 | 1 | DESM_MESAU Desmin gb |
| 28 | Canis lupus familiaris | 68.20 | 1 | desmin |
| 29 | Scyliorhinus stellaris | 63.50 | 2 | vimentin |
| 30 | Takifugu rubripes | 62.80 | 1 | TPA: desmin |
| 31 | Torpedo californica | 60.80 | 1 | IF3T_TORCA Type III intermediate filament emb |
| 32 | Pongo pygmaeus | 57.00 | 2 | hypothetical protein |
| 33 | Petromyzon marinus | 49.30 | 3 | neurofilament subunit NF-95 |
Top-ranked sequences
| organism | matching |
|---|---|
| Mus musculus | Query 60 VTRSSASRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 |||||| |||||||||||||||||||||||#|||||||||||||||||||||||||||||| Sbjct 62 VTRSSAVRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 121 |
| N/A | Query 60 VTRSSASRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 |||||| |||||||||||||||||||||||#|||||||||||||||||||||||||||||| Sbjct 62 VTRSSAVRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 121 |
| Rattus norvegicus | Query 60 VTRSSASRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 |||||| |||||+|||||||||||||||||#|||||||||||||||||||||||||||||| Sbjct 62 VTRSSAVRLRSSMPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 121 |
| Homo sapiens | Query 61 TRSSASRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 ||||| |||||||||||||||||||||||#|||||||||||||||||||||||||||||| Sbjct 63 TRSSAVRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 121 |
| Canis familiaris | Query 61 TRSSASRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 ||||| |||||||||||||||||||||||#|||||||||||||||||||||||||||||| Sbjct 63 TRSSAVRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 121 |
| Macaca mulatta | Query 61 TRSSASRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 ||||| |||||||||||||||||||||||#|||||||||||||||||||||||||||||| Sbjct 63 TRSSAVRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 121 |
| Pan troglodytes | Query 61 TRSSASRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 ||||| |||||||||||||||||||||||#|||||||||||||||||||||||||||||| Sbjct 63 TRSSAVRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 121 |
| Macaca fascicularis | Query 61 TRSSASRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 ||||| |||||||||||||||||||||||#|||||||||||||||||||||||||||||| Sbjct 63 TRSSAVRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 121 |
| synthetic construct | Query 61 TRSSASRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 ||||| |||||||||||||||||||||||#|||||||||||||||||||||||||||||| Sbjct 63 TRSSAVRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 121 |
| Pan troglodytes verus | Query 61 TRSSASRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 ||||| |||||||||||||||||||||||#|||||||||||||||||||||||||||||| Sbjct 63 TRSSAVRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 121 |
| Bos taurus | Query 61 TRSSASRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 ||||| |||| ||||||||||||||||||#|||||||||||||||||||||||||||||| Sbjct 63 TRSSAVRLRSGVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 121 |
| Ovis aries | Query 61 TRSSASRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 ||||| |||| ||||||||||||||||||#|||||||||||||||||||||||||||||| Sbjct 63 TRSSAVRLRSGVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 121 |
| Monodelphis domestica | Query 61 TRSSASRLRSS--VPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDK 118 |||||+||||| +|||||||||||||||||#||||||||||||||||||||||||||||| Sbjct 62 TRSSAARLRSSAPIPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDK 121 Query 119 V 119 | Query 119 V 119 |
| Gallus gallus | Query 61 TRSSASRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 |++++ |||||+| +|+ |+|||+||||#|||||| |||||||||||||||||||||| Sbjct 58 TKATSVRLRSSMPPMRM-HDAVDFTLADA#INTEFKANRTNEKVELQELNDRFANYIDKV 115 |
| Acipenser baerii | Query 61 TRSSASRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 |+||++||||| | ||| +++||+|+||#|||||| ||||| |+| ||||||+||||| Sbjct 53 TKSSSTRLRSSAPQTRLLSETLDFALSDA#INTEFKANRTNEKAEMQHLNDRFASYIDKV 111 |
| Daboia russellii | Query 63 SSASRLRSSVPGVRLLQDS-VDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 | | |+||| | +| |+ ||||||||#|||||| ||||| |||||||||||||||| Sbjct 59 SKAMRVRSSFPPMRTGGDAMVDFSLADA#INTEFKANRTNEKAELQELNDRFANYIDKV 116 |
| Xenopus tropicalis | Query 60 VTRSSASRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 | +||+ |||||+| || |+|||+||||#+| |+| ||||| |+|||||||||+|||| Sbjct 82 VFKSSSVRLRSSLPPARLA-DTVDFTLADA#VNLEYKANRTNEKAEMQELNDRFANFIDKV 140 |
| Xenopus laevis | Query 60 VTRSSASRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 | +||+ |||||+| |+ |||||+||||#+| ||| ||||| |+ ||||||||+|||| Sbjct 56 VFKSSSVRLRSSLPPARMA-DSVDFALADA#VNLEFKANRTNEKAEMMELNDRFANFIDKV 114 |
| Oncorhynchus mykiss | Query 67 RLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 ||||| | || |+|||+|+||#||+||| ||||| |+| ||||||+||||| Sbjct 65 RLRSSAPMPRLSSDTVDFALSDA#INSEFKANRTNEKAEMQHLNDRFASYIDKV 117 |
| Cyprinus carpio | Query 63 SSASRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 | +|+||| | || +++|| ||||#|||||| ||||| |+| ||||||+||||| Sbjct 56 SKGARVRSSGPLPRLATETLDFGLADA#INTEFKTNRTNEKAEMQHLNDRFASYIDKV 112 |
| Danio rerio | Query 60 VTRSSASRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 | | |+|| | || |++|| ||+|#|||||| ||||| |+| ||||||+||||| Sbjct 53 VYASKGLRVRSGAPLPRLATDTLDFGLAEA#INTEFKANRTNEKAEMQHLNDRFASYIDKV 112 |
| Protopterus aethiopicus | Query 60 VTRSSASRLRSS-----VPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFAN 114 |+|||| || +| + +|+|||||||#+| || |||||| ||||||||||| Sbjct 46 VSRSSAVPSYSSFRATRIPAAKTALESMDFSLADA#MNQEFIQTRTNEKAELQELNDRFAN 105 Query 115 YIDKV 119 ||+|| Sbjct 106 YIEKV 110 |
| Sus scrofa | Query 61 TRSSASRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 +| |+|+ || | | +|||||||#+| || ||||||||||||||||||||+|| Sbjct 63 SRLGATRVPSSSYGAGEL---LDFSLADA#VNQEFLTTRTNEKVELQELNDRFANYIEKV 118 |
| Cricetulus griseus | Query 85 SLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 |||||# ||||||||||||||||||||||||||||| Sbjct 1 SLADA#CNTEFKNTRTNEKVELQELNDRFANYIDKV 35 |
| Tetraodon nigroviridis | Query 63 SSASRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 | | ||| || | |||+||+|#+| || ||+||| ||||||||||++|+|| Sbjct 53 SYQQRSRSSAQAPRLSYDKVDFTLAEA#VNQEFLTTRSNEKAELQELNDRFASFIEKV 109 |
| Lampetra fluviatilis | Query 70 SSVPGVRLLQ-DSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 || |+ | +||||||||#+| +++ |||||||||||||||||+||||| Sbjct 75 SSASYVKALSGQNVDFSLADA#LNADYRTTRTNEKVELQELNDRFASYIDKV 125 |
| Mesocricetus auratus | Query 65 ASRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 |||| |+ + +|||||||#+| || ||||||||||||||||||||+|| Sbjct 71 ASRLGSTRAPSYGAGELLDFSLADA#VNQEFLATRTNEKVELQELNDRFANYIEKV 125 |
| Canis lupus familiaris | Query 82 VDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 +|||||||#+| || ||||||||||||||||||||+|| Sbjct 88 LDFSLADA#VNQEFLTTRTNEKVELQELNDRFANYIEKV 125 |
| Scyliorhinus stellaris | Query 60 VTRSSASRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 + | | ||| ||+ + +|++||| ||#+|+||| |+||| |+ ||||| ||++||| Sbjct 49 IKRRSVRVNRSSAPGIAM-GNSLNFSLVDA#MNSEFKVNRSNEKAEMIELNDRLANFLDKV 107 |
| Takifugu rubripes | Query 80 DSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 + +||+||||#+| +| ||||||| ||| ||||||+||+|| Sbjct 61 EKLDFNLADA#MNQDFLNTRTNEKAELQHLNDRFASYIEKV 100 |
| Torpedo californica | Query 60 VTRSSASRLRSSVPGVRLLQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 ++ | +||| | | ++||+| ||#+|+||| ||||| |+ ||||| ||++||| Sbjct 57 ISSRSVRLVRSSAPVVAS-SSNLDFTLVDA#MNSEFKVNRTNEKAEMIELNDRLANFLDKV 115 |
| Pongo pygmaeus | Query 73 PGVRL--------LQDSVDFSLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 || || | |||||| |#+| || || +|+ |+ |||||||+||+|| Sbjct 33 PGTRLSLARMPPPLPTRVDFSLAGA#LNAGFKETRASERAEMMELNDRFASYIEKV 87 |
| Petromyzon marinus | Query 71 SVPGVRLLQDSVDF-SLADA#INTEFKNTRTNEKVELQELNDRFANYIDKV 119 | | + ||+|| | + # + +||++| ||| ||+|||||| ||+|| Sbjct 69 STPALNSAADSLDFMSQSSV#FSGDFKHSRVNEKQLLQDLNDRFAGYIEKV 118 |
[Site 2] QIDMDVSKPD262-LTAALRDVRQ
Asp262 Leu
|
|||||||||
| P10 | P9 | P8 | P7 | P6 | P5 | P4 | P3 | P2 | P1 |
|---|---|---|---|---|---|---|---|---|---|
| Gln253 | Ile254 | Asp255 | Met256 | Asp257 | Val258 | Ser259 | Lys260 | Pro261 | Asp262 |
|
|||||||||
| P1' | P2' | P3' | P4' | P5' | P6' | P7' | P8' | P9' | P10' |
| Leu263 | Thr264 | Ala265 | Ala266 | Leu267 | Arg268 | Asp269 | Val270 | Arg271 | Gln272 |
Sequence conservation (by blast) Sequence conservation (by blast)
| Reference peptide (cleaved bond±30 residues) |
|---|
| KKLHDEEIQELQAQIQEQHVQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSK |
Summary
| # | organism | max score | hits | top seq |
|---|---|---|---|---|
| 1 | N/A | 83.20 | 25 | - |
| 2 | Canis familiaris | 83.20 | 21 | PREDICTED: similar to vimentin isoform 10 |
| 3 | Bos taurus | 83.20 | 9 | vimentin |
| 4 | Gallus gallus | 83.20 | 4 | vimentin |
| 5 | Sus scrofa domestica | 83.20 | 1 | vimentin |
| 6 | Bubalus bubalis | 83.20 | 1 | vimentin |
| 7 | Mus musculus | 81.60 | 29 | vimentin |
| 8 | Rattus norvegicus | 81.60 | 11 | vimentin |
| 9 | Ovis aries | 81.60 | 2 | vimentin |
| 10 | Cricetulus griseus | 81.60 | 1 | vimentin |
| 11 | Monodelphis domestica | 80.50 | 6 | PREDICTED: similar to vimentin |
| 12 | Homo sapiens | 80.10 | 45 | vimentin |
| 13 | Macaca mulatta | 80.10 | 10 | PREDICTED: vimentin |
| 14 | Pan troglodytes | 80.10 | 8 | vimentin |
| 15 | Macaca fascicularis | 80.10 | 4 | unnamed protein product |
| 16 | synthetic construct | 80.10 | 3 | vimentin |
| 17 | Pan troglodytes verus | 80.10 | 1 | vimentin |
| 18 | Xenopus laevis | 79.00 | 15 | vimentin 1 |
| 19 | Daboia russellii | 79.00 | 1 | AF447708_1 vimentin |
| 20 | Xenopus tropicalis | 77.80 | 5 | Unknown (protein for IMAGE:7605834) |
| 21 | Bos grunniens | 77.80 | 1 | vimentin |
| 22 | Cyprinus carpio | 73.60 | 1 | VIME_CYPCA Vimentin gb |
| 23 | Danio rerio | 72.40 | 17 | vimentin |
| 24 | Sus scrofa | 70.90 | 3 | desmin |
| 25 | Canis lupus familiaris | 70.90 | 1 | desmin |
| 26 | Mesocricetus auratus | 70.90 | 1 | DESM_MESAU Desmin gb |
| 27 | Scyliorhinus stellaris | 70.50 | 1 | desmin |
| 28 | Oncorhynchus mykiss | 70.10 | 2 | VIME_ONCMY Vimentin emb |
| 29 | Acipenser baerii | 69.70 | 2 | vimentin |
| 30 | Takifugu rubripes | 69.70 | 1 | TPA: desmin |
| 31 | Tetraodon nigroviridis | 67.80 | 7 | unnamed protein product |
| 32 | Protopterus aethiopicus | 67.80 | 1 | type III desmin |
| 33 | Oreochromis mossambicus | 65.90 | 1 | glial fibrillary acidic protein |
| 34 | Pongo pygmaeus | 64.30 | 4 | hypothetical protein |
| 35 | Dama dama | 63.50 | 1 | glial fibrillary acidic protein |
| 36 | Capreolus capreolus | 63.50 | 1 | glial fibrillary acidic protein |
| 37 | Lampetra fluviatilis | 62.80 | 1 | intermediate filament protein |
| 38 | Equus caballus | 62.40 | 1 | glial fibrillary acidic protein |
Top-ranked sequences
| organism | matching |
|---|---|
| N/A | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 ||||| ||||||||#|||||||||||||||||||||||||||||| Sbjct 235 KKLHDAEIQELQAQIQEQHVQIDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 294 |
| Canis familiaris | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 ||||| ||||||||#|||||||||||||||||||||||||||||| Sbjct 234 KKLHDEEIQELQAQIQDQHVQIDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 293 |
| Bos taurus | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 ||||| ||||||||#|||||||||||||||||||||||||||||| Sbjct 235 KKLHDEEIQELQAQIQEQHVQIDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 294 |
| Gallus gallus | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 ||||| ||||||||#|||||||||||||||||||||||||||||| Sbjct 229 KKLHDEEIRELQAQLQEQHIQIDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 288 |
| Sus scrofa domestica | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 ||||| ||||||||#|||||||||||||||||||||||||||||| Sbjct 105 KKLHDEEIQELQAQIQEQHVQIDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 164 |
| Bubalus bubalis | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 ||||| ||||||||#|||||||||||||||||||||||||||||| Sbjct 40 KKLHDEEIQELQAQIQEQHVQIDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 99 |
| Mus musculus | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 ||||| |+||||||#|||||||||||||||||||||||||||||| Sbjct 235 KKLHDEEIQELQAQIQEQHVQIDVDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 294 |
| Rattus norvegicus | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 ||||| |+||||||#|||||||||||||||||||||||||||||| Sbjct 235 KKLHDEEIQELQAQIQEQHVQIDVDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 294 |
| Ovis aries | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 ||||| |||||+||#|||||||||||||||||||||||||||||| Sbjct 235 KKLHDEEIQELQAQIQEQHVQIDMDVSQPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 294 |
| Cricetulus griseus | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 ||||| |+||||||#|||||||||||||||||||||||||||||| Sbjct 149 KKLHDEEIQELQAQIQEQHVQIDVDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 208 |
| Monodelphis domestica | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 ||||| |+||+|||#|||||||||||||||||||||||||||||| Sbjct 236 KKLHDEEIQELQAQIQEQHIQIDVDVAKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 295 |
| Homo sapiens | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 ||||+ |+||||||#|||||||||||||||||||||||||||||| Sbjct 235 KKLHEEEIQELQAQIQEQHVQIDVDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 294 |
| Macaca mulatta | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 ||||+ |+||||||#|||||||||||||||||||||||||||||| Sbjct 235 KKLHEEEIQELQAQIQEQHVQIDVDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 294 |
| Pan troglodytes | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 ||||+ |+||||||#|||||||||||||||||||||||||||||| Sbjct 235 KKLHEEEIQELQAQIQEQHVQIDVDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 294 |
| Macaca fascicularis | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 ||||+ |+||||||#|||||||||||||||||||||||||||||| Sbjct 235 KKLHEEEIQELQAQIQEQHVQIDVDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 294 |
| synthetic construct | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 ||||+ |+||||||#|||||||||||||||||||||||||||||| Sbjct 235 KKLHEEEIQELQAQIQEQHVQIDVDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 294 |
| Pan troglodytes verus | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 ||||+ |+||||||#|||||||||||||||||||||||||||||| Sbjct 235 KKLHEEEIQELQAQIQEQHVQIDVDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 294 |
| Xenopus laevis | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 ||||| ||||||||#|||||||||||||+|||||| +|||||||| Sbjct 229 KKLHDEEIRELQLQIQESHIQVDMDVSKPD#LTAALRDVRQQYENVAAKNLSDAEEWYKSK 288 |
| Daboia russellii | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 ||||+ ||||+|||#|||||||||||||||| ||||||||||||| Sbjct 230 KKLHEEEIRELQAQIQDQHIQIDMDVAKPD#LTAALRDVRQQYESVATKNLQEAEEWYKSK 289 |
| Xenopus tropicalis | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 ||||| ||||||||#|||||||||||||+|||||| +||+||||| Sbjct 254 KKLHDEEIRELQLQIQESHIQVDMDVSKPD#LTAALRDVRQQYENVAAKNLSDAEDWYKSK 313 |
| Bos grunniens | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWY 289 ||||| ||||||||#||||||||||||||||||||||||||| Sbjct 48 KKLHDEEIQELQAQIQEQHVQIDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWY 104 |
| Cyprinus carpio | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 ||||| ||+|+|||#|||||+|||||||++|++||||+||||||| Sbjct 226 KKLHDEELAELQIQIQEQHVQIDMEVAKPD#LTAALKDVRQQYETLASRNLQESEEWYKSK 285 |
| Danio rerio | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 ||||| ||+|+|||#|||||+|||||||++|++||||+|+||||| Sbjct 226 KKLHDEELAEMQIQMQEQHLQIDMEVTKPD#LTAALKDVRQQYETLASRNLQESEDWYKSK 285 |
| Sus scrofa | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 ||+|+ +||+||||#|||||||+| |||++||||+ ||||||||| Sbjct 232 KKVHEEEIRELQAQLQEQQVQVEMDMSKPD#LTAALRDIRAQYETIAAKNISEAEEWYKSK 291 |
| Canis lupus familiaris | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 ||+|+ +||+||||#|||||||+| |||++||||+ ||||||||| Sbjct 239 KKVHEEEIRELQAQLQEQQVQVEMDMSKPD#LTAALRDIRAQYETIAAKNISEAEEWYKSK 298 |
| Mesocricetus auratus | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 ||+|+ +||+||||#|||||||+| |||++||||+ ||||||||| Sbjct 239 KKVHEEEIRELQAQLQEQQVQVEMDMSKPD#LTAALRDIRAQYETIAAKNISEAEEWYKSK 298 |
| Scyliorhinus stellaris | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 ||+|+ +||+||||#|||||||+| ||| ++|||+|||||||||| Sbjct 224 KKVHEEELRELQAQLQEQHVQVEMDLSKPD#LTAALRDIRAQYECISAKNVQEAEEWYKSK 283 |
| Oncorhynchus mykiss | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 +|||| ||||+|||#||||||||| |||++|++|||++|+||||| Sbjct 231 RKLHDEEVAELQAQIQDQHVQIDMDVAKPD#LTAALRDVRVQYETLASRNLQDSEDWYKSK 290 |
| Acipenser baerii | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 +|||| ||||+|||#||||||||| |||++|+||+ |+|+||||| Sbjct 225 RKLHDEELAELQVQIQEQHIQIDMDVAKPD#LTAALRDVRLQYENLASKNMSESEDWYKSK 284 |
| Takifugu rubripes | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 ||+|+ ||+||||#|||||||+| ||| +||||+ ||||||||| Sbjct 215 KKIHEEEIRELQSQMQETQVQIQMDMSKPD#LTAALRDIRVQYEGIAAKNISEAEEWYKSK 274 |
| Tetraodon nigroviridis | Query 255 DMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 |+||||||#|||||||+| ||||||+ |+|| ||||+|| Sbjct 69 DLDVSKPD#LTAALRDIRIQYESVASSNMQETEEWYRSK 106 |
| Protopterus aethiopicus | Query 255 DMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 +||+||||#|||||||+| ||||+||||+ +||||||+| Sbjct 246 EMDMSKPD#LTAALRDIRAQYESIAAKNIADAEEWYKTK 283 |
| Oreochromis mossambicus | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKS 291 ||+|+ |+||||||#|||||||+| |||++|+ |+|| ||||+| Sbjct 121 KKIHEDELRELQEQIMAQQVHVDLDVSKPD#LTAALRDIRVQYENMASSNMQETEEWYRS 179 |
| Pongo pygmaeus | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 ||+|+ +|||+|||#|+|||+|+| ||| +||||+| ||||+||+ Sbjct 224 KKVHEEEIAELQAQIQYAQISVEMDVTKPD#LSAALKDIRAQYEKLAAKNMQNAEEWFKSR 283 |
| Dama dama | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 +|+|+ +|||+|||#||||||++| |||++|+ |+ ||||||+|| Sbjct 45 RKIHEEEVRELQEQLAQQQVHVEMDVAKPD#LTAALREIRTQYEAMASSNMHEAEEWYRSK 104 |
| Capreolus capreolus | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 +|+|+ +|||+|||#||||||++| |||++|+ |+ ||||||+|| Sbjct 45 RKIHEEEVRELQEQLAQQQVHVEMDVAKPD#LTAALREIRTQYEAMASSNMHEAEEWYRSK 104 |
| Lampetra fluviatilis | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 || || ++| |||#| ||||||| ||||+|+ |||||| |+||| Sbjct 132 KKAHDEEVRELQAMMQEQQVTVEVDTVKPD#LAAALRDVRAQYESIASSNLQEAETWFKSK 191 |
| Equus caballus | Query 233 KKLHDXXXXXXXXXXXXXXXXXDMDVSKPD#LTAALRDVRQQYESVAAKNLQEAEEWYKSK 292 +|+|+ ++||+|||#||||||++| |||++|+ |+ ||||||+|| Sbjct 45 RKIHEEEVRELQEQLAQQQVHVELDVAKPD#LTAALREIRTQYEAMASSNMHEAEEWYRSK 104 |
* References
None.