CaMPDB :: Substrate

XSB2626 : epidermal growth factor receptor, isoform CRA_b [Rattus norvegicus]

This entry is computationally expanded from SB0050

* Basic Information

Organism	Rattus norvegicus (Norway rat)
Protein Names	epidermal growth factor receptor; isoform CRA_b
Gene Names	Egfr
Gene Locus	Not available
GO Function	Not available

Entrez Protein	Entrez Nucleotide	Entrez Gene	UniProt	OMIM	HGNC	HPRD	KEGG
EDL97896	N/A	24329	N/A	N/A	N/A	N/A	N/A

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 1209 aa

Average Mass: 134.896 kDa

Monoisotopic Mass: 134.809 kDa

2. Domain Information

Annotated Domains: Not Available.

Computationally Assigned Domains (Pfam+HMMER):

domain name	begin	end	score	e-value
Recep_L_domain 1.	57	168	148.1	2.6e-41
Furin-like 1.	184	338	259.4	8.6e-75
Recep_L_domain 2.	361	481	140.9	4e-39
Toxin_16 1.	490	529	-1.8	7.2
Fer4 1.	572	601	-7.4	6.4
Gram_pos_anchor 1.	636	673	-1.0	3.9
Pkinase_Tyr 1.	713	969	443.3	3.6e-130
--- cleavage 734 (inside Pkinase_Tyr 713..969) ---
Extensin_2 1.	1066	1130	-8.3	8.2

3. Sequence Information

Fasta Sequence: XSB2626.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

2 [sites]

Cleavage sites (±10aa)

[Site 1] GTVYKGLWIP⁷³⁴-EGEKVKIPVA

Pro⁷³⁴ Glu

P10	P9	P8	P7	P6	P5	P4	P3	P2	P1

Gly⁷²⁵	Thr⁷²⁶	Val⁷²⁷	Tyr⁷²⁸	Lys⁷²⁹	Gly⁷³⁰	Leu⁷³¹	Trp⁷³²	Ile⁷³³	Pro⁷³⁴

P1'	P2'	P3'	P4'	P5'	P6'	P7'	P8'	P9'	P10'
Glu⁷³⁵	Gly⁷³⁶	Glu⁷³⁷	Lys⁷³⁸	Val⁷³⁹	Lys⁷⁴⁰	Ile⁷⁴¹	Pro⁷⁴²	Val⁷⁴³	Ala⁷⁴⁴

Sequence conservation (by blast) Sequence conservation (by blast)

Reference peptide (cleaved bond±30 residues)
LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA

Summary

#	organism	max score	hits	top seq
1	N/A	120.00	21	-
2	Homo sapiens	120.00	15	epidermal growth factor receptor
3	Mus musculus	120.00	8	AF275367_1 epidermal growth factor receptor
4	Rattus norvegicus	120.00	7	epidermal growth factor receptor
5	Pan troglodytes	120.00	7	PREDICTED: epidermal growth factor receptor isofor
6	synthetic construct	120.00	4	epidermal growth factor receptor
7	Monodelphis domestica	120.00	3	PREDICTED: similar to Epidermal growth factor rece
8	Canis familiaris	120.00	3	PREDICTED: similar to Epidermal growth factor rece
9	Macaca mulatta	120.00	3	PREDICTED: epidermal growth factor receptor, parti
10	Rous-associated virus type 1	119.00	2	polyprotein
11	Sus scrofa	119.00	2	epidermal growth factor receptor
12	Bos taurus	119.00	1	PREDICTED: similar to epidermal growth factor rece
13	Xenopus laevis	115.00	3	epidermal growth factor receptor
14	Avian erythroblastosis virus	115.00	2	gag,v-erb-A,v-erb-B
15	Danio rerio	112.00	4	epidermal growth factor receptor
16	Tetraodon nigroviridis	111.00	3	unnamed protein product
17	Xiphophorus xiphidium	110.00	2	epidermal growth factor receptor
18	Gallus gallus	107.00	4	erbB-2
19	Felis catus	106.00	2	v-erb-b2 erythroblastic leukemia viral oncogene ho
20	Mesocricetus auratus	106.00	1	ERBB2_MESAU Receptor tyrosine-protein kinase erbB-
21	Canis lupus familiaris	106.00	1	erbB-2
22	Xiphophorus sp.	102.00	1	XMRK_XIPMA Melanoma receptor tyrosine-protein kina
23	Ovis aries	94.00	1	erythroblastic leukemia viral oncogene-like 2
24	Strongylocentrotus purpuratus	80.90	1	PREDICTED: similar to v-erb-a erythroblastic leuke
25	Drosophila melanogaster	80.10	147	mutant epidermal growth factor receptor
26	Drosophila simulans	78.20	1	epidermal growth factor receptor

Top-ranked sequences

organism	matching
N/A	Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|#\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764
Homo sapiens	Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|#\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764
Mus musculus	Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|#\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764
Rattus norvegicus	Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|#\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764
Pan troglodytes	Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|#\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764
synthetic construct	Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|#\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764
Monodelphis domestica	Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|#\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764
Canis familiaris	Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|#\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764
Macaca mulatta	Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|#\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764
Rous-associated virus type 1	Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764 \|\|\|\|\|\|\|\|\|\|\|+\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|#\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct 278 LRILKETEFKKVKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 337
Sus scrofa	Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764 \|\|\|\|\|\|\|\|\|\|\|+\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|#\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct 704 LRILKETEFKKVKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 763
Bos taurus	Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764 \|\|\|\|\|\|\|\|\|\|\|+\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|#\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct 681 LRILKETEFKKVKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 740
Xenopus laevis	Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|+\|\|\|\|\|#\|\|\| +\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct 289 LRILKETEFKKIKVLGSGAFGTVYQGLWIP#EGEGIKIPVAIKELREATSPKANKEILDEA 348
Avian erythroblastosis virus	Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764 \|\|\|\|\|\|\|\|\|\|\|+\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|#\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct 546 LRILKETEFKKVKVLGFGAFGTVYKGLWIP#EGEKVTIPVAIKELREATSPKANKEILDEA 605
Danio rerio	Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|+\|\|\|\|+\|#\|\|\| \|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|+\|\|\| Sbjct 703 LRILKETEFKKIKVLGSGAFGTVHKGLWVP#EGENVKIPVAIKVLREATSPKANKEIMDEA 762
Tetraodon nigroviridis	Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764 \|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|+\|#\|\|\| \|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|+\|\|\|\|\| Sbjct 674 LRILKEPEFKKIKVLGSGAFGTVYKGLWVP#EGEDVKIPVAIKVLREATSPKANKDILDEA 733
Xiphophorus xiphidium	Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764 \|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|+\|#\|\|\| \|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|+\|\|\|\|\|\| Sbjct 714 LRILKEPEFKKIKVLGSGAFGTVYKGLWVP#EGEDVKIPVAIKVLREATSPKANQEILDEA 773
Gallus gallus	Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764 +\|\|\|\|\|\|\| \|\|+\|\|\|\|\|\|\|\|\|\|\|\|\|\|+\|\|\|#+\|\| \|\|\|\|\|\|\|\| \|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct 701 MRILKETELKKVKVLGSGAFGTVYKGIWIP#DGESVKIPVAIKVLRENTSPKANKEILDEA 760
Felis catus	Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764 +\|\|\|\|\|\|\| +\|+\|\|\|\|\|\|\|\|\|\|\|\|\|\|+\|\|\|#+\|\| \|\|\|\|\|\|\|\| \|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct 712 MRILKETELRKVKVLGSGAFGTVYKGIWIP#DGENVKIPVAIKVLRENTSPKANKEILDEA 771
Mesocricetus auratus	Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764 +\|\|\|\|\|\|\| +\|+\|\|\|\|\|\|\|\|\|\|\|\|\|\|+\|\|\|#+\|\| \|\|\|\|\|\|\|\| \|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct 712 MRILKETELRKVKVLGSGAFGTVYKGIWIP#DGENVKIPVAIKVLRENTSPKANKEILDEA 771
Canis lupus familiaris	Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764 +\|\|\|\|\|\|\| +\|+\|\|\|\|\|\|\|\|\|\|\|\|\|\|+\|\|\|#+\|\| \|\|\|\|\|\|\|\| \|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct 711 MRILKETELRKVKVLGSGAFGTVYKGIWIP#DGENVKIPVAIKVLRENTSPKANKEILDEA 770
Xiphophorus sp.	Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764 \|\|\|\|\|\|\|\|\|\|\| +\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|#+\|\| ++\|\|\|\|\|\| \|\|\|\|\|\|\|\| \|+\|+\|\|\|\| Sbjct 702 LRILKETEFKKDRVLGSGAFGTVYKGLWNP#DGENIRIPVAIKVLREATSPKVNQEVLDEA 761
Ovis aries	Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKAN 757 +\|\|\|\|\|\|\| +\|+\|\|\|\|\|\|\|\|\|\|\|\|\|\|+\|\|\|#+\|\| \|\|\|\|\|\|\|\| \|\|\| \|\|\|\|\|\| Sbjct 63 MRILKETELRKVKVLGSGAFGTVYKGIWIP#DGENVKIPVAIKVLRENTSPKAN 115
Strongylocentrotus purpuratus	Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILD 762 \|+\|+\|+\|\| \| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|#+\|\|\|++\|\|\|\|\|\| \|\|\| \|\| \| +\|+\|+ Sbjct 1012 LKIIKDTELKLGPVLGSGAFGTVYKGLWIP#DGEKIRIPVAIKALRE-VSPHAAEELLE 1068
Drosophila melanogaster	Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764 \|\|\|+\|+\|\| +\| \|\|\| \|\|\|\| \|\|\|\|+\|+\|#\|\|\| \|\|\|\|\|\|\|\|\|\| ++\| ++++\| \| \|\| Sbjct 830 LRIVKDTELRKGGVLGMGAFGRVYKGVWVP#EGENVKIPVAIKELLKSTGAESSEEFLREA 889
Drosophila simulans	Query 705 LRILKETEFKKIKVLGSGAFGTVYKGLWIP#EGEKVKIPVAIKELREATSPKANKEILDEA 764 \|\|\|+\|+ \| +\| \|\|\| \|\|\|\| \|\|\|\|+\|+\|#\|\|\| \|\|\|\|\|\|\|\|\|\| ++\| ++++\| \| \|\| Sbjct 829 LRIVKDAELRKGGVLGMGAFGRVYKGVWVP#EGENVKIPVAIKELLKSTGAESSEEFLREA 888

[Site 2] FFPKEAKPNG¹¹⁸⁴-IFKGPTAENA

Gly¹¹⁸⁴ Ile

P10	P9	P8	P7	P6	P5	P4	P3	P2	P1

Phe¹¹⁷⁵	Phe¹¹⁷⁶	Pro¹¹⁷⁷	Lys¹¹⁷⁸	Glu¹¹⁷⁹	Ala¹¹⁸⁰	Lys¹¹⁸¹	Pro¹¹⁸²	Asn¹¹⁸³	Gly¹¹⁸⁴

P1'	P2'	P3'	P4'	P5'	P6'	P7'	P8'	P9'	P10'
Ile¹¹⁸⁵	Phe¹¹⁸⁶	Lys¹¹⁸⁷	Gly¹¹⁸⁸	Pro¹¹⁸⁹	Thr¹¹⁹⁰	Ala¹¹⁹¹	Glu¹¹⁹²	Asn¹¹⁹³	Ala¹¹⁹⁴

Sequence conservation (by blast) Sequence conservation (by blast)

Reference peptide (cleaved bond±30 residues)
LWIQKGSHQMSLDNPDYQQDFFPKEAKPNGIFKGPTAENAEYLRVAPPSSEFIGA

Summary

#	organism	max score	hits	top seq
1	N/A	117.00	5	-
2	Mus musculus	117.00	3	AF275367_1 epidermal growth factor receptor
3	Rattus norvegicus	117.00	1	epidermal growth factor receptor
4	Homo sapiens	108.00	5	cell growth inhibiting protein 40
5	Pan troglodytes	108.00	4	PREDICTED: epidermal growth factor receptor isofor
6	synthetic construct	108.00	1	epidermal growth factor receptor
7	Equus caballus	108.00	1	epidermal growth factor receptor
8	Canis familiaris	104.00	1	PREDICTED: similar to Epidermal growth factor rece
9	Bos taurus	98.20	1	PREDICTED: similar to epidermal growth factor rece
10	Sus scrofa	89.70	2	epidermal growth factor receptor
11	Monodelphis domestica	81.60	1	PREDICTED: similar to Epidermal growth factor rece
12	Xenopus laevis	70.50	1	epidermal growth factor receptor
13	Tetraodon nigroviridis	40.00	1	unnamed protein product
14	Danio rerio	39.70	3	epidermal growth factor receptor
15	Xiphophorus xiphidium	38.50	1	epidermal growth factor receptor

Top-ranked sequences

organism	matching
N/A	Query 1155 LWIQKGSHQMSLDNPDYQQDFFPKEAKPNG#IFKGPTAENAEYLRVAPPSSEFIGA 1209 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|#\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct 1156 LWIQKGSHQMSLDNPDYQQDFFPKETKPNG#IFKGPTAENAEYLRVAPPSSEFIGA 1210
Mus musculus	Query 1155 LWIQKGSHQMSLDNPDYQQDFFPKEAKPNG#IFKGPTAENAEYLRVAPPSSEFIGA 1209 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|#\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct 1156 LWIQKGSHQMSLDNPDYQQDFFPKETKPNG#IFKGPTAENAEYLRVAPPSSEFIGA 1210
Rattus norvegicus	Query 1155 LWIQKGSHQMSLDNPDYQQDFFPKEAKPNG#IFKGPTAENAEYLRVAPPSSEFIGA 1209 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|#\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\| Sbjct 1155 LWIQKGSHQMSLDNPDYQQDFFPKEAKPNG#IFKGPTAENAEYLRVAPPSSEFSGA 1209
Homo sapiens	Query 1156 WIQKGSHQMSLDNPDYQQDFFPKEAKPNG#IFKGPTAENAEYLRVAPPSSEFIGA 1209 \| \|\|\|\|\|\|+\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|#\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\| Sbjct 1157 WAQKGSHQISLDNPDYQQDFFPKEAKPNG#IFKGSTAENAEYLRVAPQSSEFIGA 1210
Pan troglodytes	Query 1156 WIQKGSHQMSLDNPDYQQDFFPKEAKPNG#IFKGPTAENAEYLRVAPPSSEFIGA 1209 \| \|\|\|\|\|\|+\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|#\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\| Sbjct 1157 WAQKGSHQISLDNPDYQQDFFPKEAKPNG#IFKGSTAENAEYLRVAPQSSEFIGA 1210
synthetic construct	Query 1156 WIQKGSHQMSLDNPDYQQDFFPKEAKPNG#IFKGPTAENAEYLRVAPPSSEFIGA 1209 \| \|\|\|\|\|\|+\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|#\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\| Sbjct 1157 WAQKGSHQISLDNPDYQQDFFPKEAKPNG#IFKGSTAENAEYLRVAPQSSEFIGA 1210
Equus caballus	Query 1155 LWIQKGSHQMSLDNPDYQQDFFPKEAKPNG#IFKGPTAENAEYLRVAPPSSEFIG 1208 \|\| \|\|\|+\|\|+\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|#\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct 51 LWAQKGNHQISLDNPDYQQDFFPKEAKSNG#IFKGPAAENAEYLRVAPPSSEFIG 104
Canis familiaris	Query 1155 LWIQKGSHQMSLDNPDYQQDFFPKEAKPNG#IFKGPTAENAEYLRVAPPSSEFIGA 1209 \|\| \|+ +\|\|+\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|#\|\|\|\|\| \|\|\|\|+\|\|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct 1541 LWTQEANHQISLDNPDYQQDFFPKEAKSNG#IFKGPAAENADYLRVAPPSSEFIGA 1595
Bos taurus	Query 1155 LWIQKGSHQMSLDNPDYQQDFFPKEAKPNG#IFKGPTAENAEYLRVAPPSSEFIGA 1209 \|\| \|\|\|\|\|\| \|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\| \|\|#\|\|\|\|\| \|\|\|\|\|\|\|\| \|\| \|+\| \|\| Sbjct 1131 LWAQKGSHQFSLDNPDYQQAFFPKEAKSNG#IFKGPAAENAEYLRAAPAGSDFTGA 1185
Sus scrofa	Query 1156 WIQKGSHQMSLDNPDYQQDFFPKEAKPNG#IFKGPTAENAEYLRVAPPSSEFIGA 1209 \| \| \|\|\|\|++\|\|\|\|\|\|\|\| \|\|\|\|\|\|\| \|\|#\| \|\|\| \|\|\|\|\|\|\|\| \|\| \|\|+ \|\| Sbjct 1156 WAQTGSHQINLDNPDYQQAFFPKEAKSNG#ICKGPAAENAEYLRAAPASSDLTGA 1209
Monodelphis domestica	Query 1156 WIQKGSHQMSLDNPDYQQDFFPKEAKPNG#IFKGPTAENAEYLRVAPPSSEFIGA 1209 \| \| ++\|\|\|\|\|\|\|\|\|\|\|\|+\|\|\|\|\|\|#+\|\| \| \|\|\| \|\|\|\|\|\| \|\|\|\| \| Sbjct 1184 WNPTAKHPINLDNPDYQQDFFPQEAKPNG#VFKVPAAENPEYLRVAAQQSEFIQA 1237
Xenopus laevis	Query 1155 LWIQKGSHQMSLDNPDYQQDFFPKEAKPNG#IFKGPTAENAEYLRVAPPS 1203 +\| \|\| + \|++\|\|\|\|\|\|\|\|\|\|\|\|\|\| \| \|\|# \|\| \| \|+\| \|\|\| +\|\| \| Sbjct 739 IWDQKANIQINLDNPDYQQDFFPKEPKTNG#HFKIPAAQNPEYLGLAPVS 787
Tetraodon nigroviridis	Query 1158 QKGSHQMSLDNPDYQQDFFPK-EAKPNG#IFKGPTAENAEYLRV 1199 \|\| + \| \|+\|\|\|\|\|\|\|\|\| \| + \|\|# \| \|\|\| \|\| \| Sbjct 1054 QKYAPQNSIDNPDYQQDFTPTFKTHTNG#HI--PAAENTEYTSV 1094
Danio rerio	Query 1165 SLDNPDYQQDFFPKEAKPNG#IFKGPTAENAEYL 1197 \|+\|\|\|\|\|\|\|\|\| \| \| \| + # \| \|+\| \|\|+ Sbjct 1154 SMDNPDYQQDFCPLELKTHT#NGHLPAAQNQEYM 1186
Xiphophorus xiphidium	Query 1163 QMSLDNPDYQQDFFPK-EAKPNG#IFKGPTAENAEYL 1197 \| \|+\|\|\|\|\|\|\|\|\| \| + \|\|# \| \|\|\| \|\|\| Sbjct 1173 QNSMDNPDYQQDFTPTFKTHTNG#HI--PAAENVEYL 1206

* References

[PubMed ID: 15632090] Florea L, Di Francesco V, Miller J, Turner R, Yao A, Harris M, Walenz B, Mobarry C, Merkulov GV, Charlab R, Dew I, Deng Z, Istrail S, Li P, Sutton G, Gene and alternative splicing annotation with AIR. Genome Res. 2005 Jan;15(1):54-66.