logo CaMPDB: Calpain for Modulatory Proteolysis Database

XSB2809 : PREDICTED: similar to Integrin beta-7 precursor (Integrin beta-P) (M290 IEL antigen) [Rattus norvegicus]

[ CaMP Format ]

This entry is computationally expanded from SB0062

* Basic Information

OrganismRattus norvegicus (Norway rat)
Protein Namessimilar to Integrin beta-7 precursor (Integrin beta-P) (M290 IEL antigen)
Gene NamesItgb7; Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 24 Proteins
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
XP_343337 XM_343336 25713 N/A N/A N/A N/A N/A

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 807 aa

Average Mass: 87.629 kDa

Monoisotopic Mass: 87.572 kDa

2. Domain Information

Annotated Domains: Not Available.

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Integrin_beta 1. 504771038.00
EGF_2 1. 47951217.60.027
EGF_2 2. 52856017.60.027
EGF_2 3. 56759719.70.012
EGF_2 4. 60663630.56.9e-06
Integrin_B_tail 1. 64672388.72e-23
Integrin_b_cyt 1. 74779287.16.1e-23
--- cleavage 765 (inside Integrin_b_cyt 747..792) ---
--- cleavage 766 (inside Integrin_b_cyt 747..792) ---

3. Sequence Information

Fasta Sequence: XSB2809.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

2 [sites]

Cleavage sites (±10aa)

[Site 1] LEYSRFEKER765-QQLNWKQDSN

Arg765 Gln

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Leu756Glu757Tyr758Ser759Arg760Phe761Glu762Lys763Glu764Arg765
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Gln766Gln767Leu768Asn769Trp770Lys771Gln772Asp773Ser774Asn775

Sequence conservation (by blast)

[Site 2] EYSRFEKERQ766-QLNWKQDSNP

Gln766 Gln

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Glu757Tyr758Ser759Arg760Phe761Glu762Lys763Glu764Arg765Gln766
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Gln767Leu768Asn769Trp770Lys771Gln772Asp773Ser774Asn775Pro776

Sequence conservation (by blast)

* References

None.