XSB2950 : PREDICTED: integrin, beta 3 [Taeniopygia guttata]
[ CaMP Format ]
This entry is computationally expanded from SB0043
* Basic Information
| Organism | Taeniopygia guttata |
| Protein Names | integrin; beta 3 |
| Gene Names | LOC100226539; gene.702454; Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 13 Proteins |
| Gene Locus | Not available |
| GO Function | Not available |
| Entrez Protein | Entrez Nucleotide | Entrez Gene | UniProt | OMIM | HGNC | HPRD | KEGG |
|---|---|---|---|---|---|---|---|
| XP_002198873 | XM_002198837 | 100226539 | N/A | N/A | N/A | N/A | N/A |
* Information From OMIM
Not Available.
* Structure Information
1. Primary Information
Length: 781 aa
Average Mass: 85.982 kDa
Monoisotopic Mass: 85.926 kDa
2. Domain Information
Annotated Domains: Not Available.
Computationally Assigned Domains (Pfam+HMMER):
| domain name | begin | end | score | e-value |
|---|---|---|---|---|
| Integrin_beta 1. | 31 | 453 | 953.8 | 8e-284 |
| EGF_2 1. | 455 | 489 | 17.3 | 0.03 |
| EGF_2 2. | 504 | 539 | 33.9 | 6.6e-07 |
| EGF_2 3. | 546 | 576 | 27.2 | 6.8e-05 |
| EGF_2 4. | 585 | 616 | 30.5 | 6.9e-06 |
| Integrin_B_tail 1. | 626 | 710 | 137.0 | 5.8e-38 |
| Integrin_b_cyt 1. | 734 | 779 | 99.4 | 1.2e-26 |
| --- cleavage 777 (inside Integrin_b_cyt 734..779) --- | ||||
| --- cleavage 753 (inside Integrin_b_cyt 734..779) --- | ||||
3. Sequence Information
Fasta Sequence: XSB2950.fasta
Amino Acid Sequence and Secondary Structures (PsiPred):
4. 3D Information
Not Available.
* Cleavage Information
2 [sites]
Cleavage sites (±10aa)
[Site 1] ATSTFTNITY777-RGNM
Tyr777 
Arg
 |
|||||||||
| P10 | P9 | P8 | P7 | P6 | P5 | P4 | P3 | P2 | P1 |
|---|---|---|---|---|---|---|---|---|---|
| Ala768 | Thr769 | Ser770 | Thr771 | Phe772 | Thr773 | Asn774 | Ile775 | Thr776 | Tyr777 |
 |
|||||||||
| P1' | P2' | P3' | P4' | P5' | P6' | P7' | P8' | P9' | P10' |
| Arg778 | Gly779 | Asn780 | Met781 | - | - | - | - | - | - |
Sequence conservation (by blast)
Sequence conservation (by blast)
| Reference peptide (cleaved bond±30 residues) |
|---|
| FEEEKARAKWDTTHNPLYKEATSTFTNITYRGNM |
Summary
| # | organism | max score | hits | top seq |
|---|---|---|---|---|
| 1 | Gallus gallus | 70.90 | 6 | integrin, beta 3 precursor |
| 2 | Xenopus laevis | 67.40 | 5 | integrin beta-3 subunit |
| 3 | N/A | 66.20 | 17 | - |
| 4 | Mus musculus | 66.20 | 10 | unnamed protein product |
| 5 | Homo sapiens | 66.20 | 9 | integrin beta chain, beta 3 precursor |
| 6 | Rattus norvegicus | 66.20 | 7 | integrin beta 3 |
| 7 | Canis familiaris | 66.20 | 7 | platelet glycoprotein IIIa |
| 8 | Macaca mulatta | 66.20 | 7 | PREDICTED: similar to integrin beta chain, beta 3 |
| 9 | Pan troglodytes | 66.20 | 7 | PREDICTED: integrin beta chain, beta 3 isoform 4 |
| 10 | Bos taurus | 66.20 | 6 | PREDICTED: similar to platelet glycoprotein IIIa i |
| 11 | Sus scrofa | 66.20 | 5 | AF170527_1 glycoprotein IIIa; GPIIIa |
| 12 | synthetic construct | 66.20 | 3 | AF239959_1 hybrid integrin beta 3 subunit precurso |
| 13 | Oryctolagus cuniculus | 66.20 | 2 | glycoprotein IIIa |
| 14 | Equus caballus | 66.20 | 1 | integrin, beta 3 (platelet glycoprotein IIIa, anti |
| 15 | Canis lupus familiaris | 66.20 | 1 | integrin beta chain, beta 3 |
| 16 | rats, Peptide Partial, 723 aa | 66.20 | 1 | beta 3 integrin, GPIIIA |
| 17 | Danio rerio | 63.90 | 8 | hypothetical protein LOC100001836 |
| 18 | Tetraodon nigroviridis | 63.90 | 5 | unnamed protein product |
| 19 | Monodelphis domestica | 63.90 | 4 | PREDICTED: similar to platelet glycoprotein IIIa |
| 20 | mice, Peptide Partial, 680 aa | 59.30 | 1 | beta 3 integrin, GPIIIA |
| 21 | Pseudoplusia includens | 50.10 | 1 | integrin beta 1 |
| 22 | Ostrinia furnacalis | 50.10 | 1 | integrin beta 1 precursor |
| 23 | Anopheles gambiae | 48.90 | 1 | integrin beta subunit |
| 24 | Anopheles gambiae str. PEST | 48.90 | 1 | ENSANGP00000021373 |
| 25 | Aedes aegypti | 48.90 | 1 | integrin beta subunit |
| 26 | Biomphalaria glabrata | 48.50 | 1 | beta integrin subunit |
| 27 | Crassostrea gigas | 48.50 | 1 | integrin beta cgh |
| 28 | Drosophila melanogaster | 48.10 | 1 | myospheroid CG1560-PA |
| 29 | Tribolium castaneum | 47.80 | 2 | PREDICTED: similar to CG1560-PA |
| 30 | Ovis aries | 46.20 | 1 | ITB6_SHEEP Integrin beta-6 precursor emb |
| 31 | Caenorhabditis briggsae | 45.40 | 1 | Hypothetical protein CBG03601 |
| 32 | Caenorhabditis elegans | 45.40 | 1 | Paralysed Arrest at Two-fold family member (pat-3) |
| 33 | Pongo pygmaeus | 44.70 | 2 | hypothetical protein |
| 34 | Felis catus | 43.50 | 1 | integrin beta 1 |
| 35 | Xenopus tropicalis | 43.50 | 1 | integrin beta 1 (fibronectin receptor beta) |
| 36 | Ictalurus punctatus | 41.60 | 1 | beta-1 integrin |
| 37 | Podocoryne carnea | 41.20 | 1 | AF308652_1 integrin beta chain |
| 38 | Apis mellifera | 40.40 | 1 | PREDICTED: similar to myospheroid CG1560-PA |
| 39 | Strongylocentrotus purpuratus | 39.70 | 4 | integrin beta G subunit |
| 40 | Lytechinus variegatus | 39.70 | 1 | beta-C integrin subunit |
| 41 | Acropora millepora | 38.50 | 1 | integrin subunit betaCn1 |
| 42 | Oncorhynchus mykiss | 35.00 | 1 | CD18 protein |
| 43 | Mus sp. | 33.10 | 1 | beta 7 integrin |
Top-ranked sequences
| organism | matching |
|---|---|
| Gallus gallus | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RGNM 781 |||||||||||| +||||||||||||||||#|||| Sbjct 748 FEEEKARAKWDTGNNPLYKEATSTFTNITY#RGNM 781 |
| Xenopus laevis | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RGN 780 ||||+|+||||| |||||| ||||||||||#||| Sbjct 754 FEEERAKAKWDTAHNPLYKGATSTFTNITY#RGN 786 |
| N/A | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 ||||+||||||| +||||||||||||||||#|| Sbjct 756 FEEERARAKWDTANNPLYKEATSTFTNITY#RG 787 |
| Mus musculus | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 ||||+||||||| +||||||||||||||||#|| Sbjct 755 FEEERARAKWDTANNPLYKEATSTFTNITY#RG 786 |
| Homo sapiens | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 ||||+||||||| +||||||||||||||||#|| Sbjct 756 FEEERARAKWDTANNPLYKEATSTFTNITY#RG 787 |
| Rattus norvegicus | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 ||||+||||||| +||||||||||||||||#|| Sbjct 755 FEEERARAKWDTANNPLYKEATSTFTNITY#RG 786 |
| Canis familiaris | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 ||||+||||||| +||||||||||||||||#|| Sbjct 752 FEEERARAKWDTANNPLYKEATSTFTNITY#RG 783 |
| Macaca mulatta | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 ||||+||||||| +||||||||||||||||#|| Sbjct 756 FEEERARAKWDTANNPLYKEATSTFTNITY#RG 787 |
| Pan troglodytes | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 ||||+||||||| +||||||||||||||||#|| Sbjct 756 FEEERARAKWDTANNPLYKEATSTFTNITY#RG 787 |
| Bos taurus | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 ||||+||||||| +||||||||||||||||#|| Sbjct 752 FEEERARAKWDTANNPLYKEATSTFTNITY#RG 783 |
| Sus scrofa | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 ||||+||||||| +||||||||||||||||#|| Sbjct 752 FEEERARAKWDTANNPLYKEATSTFTNITY#RG 783 |
| synthetic construct | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 ||||+||||||| +||||||||||||||||#|| Sbjct 756 FEEERARAKWDTANNPLYKEATSTFTNITY#RG 787 |
| Oryctolagus cuniculus | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 ||||+||||||| +||||||||||||||||#|| Sbjct 756 FEEERARAKWDTANNPLYKEATSTFTNITY#RG 787 |
| Equus caballus | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 ||||+||||||| +||||||||||||||||#|| Sbjct 752 FEEERARAKWDTANNPLYKEATSTFTNITY#RG 783 |
| Canis lupus familiaris | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 ||||+||||||| +||||||||||||||||#|| Sbjct 752 FEEERARAKWDTANNPLYKEATSTFTNITY#RG 783 |
| rats, Peptide Partial, 723 aa | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 ||||+||||||| +||||||||||||||||#|| Sbjct 691 FEEERARAKWDTANNPLYKEATSTFTNITY#RG 722 |
| Danio rerio | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 ||||+|||||+| |||||| ||||||||||#|| Sbjct 757 FEEERARAKWETGHNPLYKGATSTFTNITY#RG 788 |
| Tetraodon nigroviridis | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 ||||+||||||| |||||| |||||||||+#|| Sbjct 771 FEEERARAKWDTGHNPLYKGATSTFTNITF#RG 802 |
| Monodelphis domestica | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#R 778 ||||+||||||| +||||||||||||||||#| Sbjct 731 FEEERARAKWDTANNPLYKEATSTFTNITY#R 761 |
| mice, Peptide Partial, 680 aa | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNIT 776 ||||+||||||| +||||||||||||||| Sbjct 652 FEEERARAKWDTANNPLYKEATSTFTNIT 680 |
| Pseudoplusia includens | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 ||+|+ ||||| ||+||+||||| | ||# | Sbjct 805 FEKERMMAKWDTGENPIYKQATSTFKNPTY#AG 836 |
| Ostrinia furnacalis | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 ||+|+ ||||| ||+||+||||| | ||# | Sbjct 799 FEKERMMAKWDTGENPIYKQATSTFKNPTY#AG 830 |
| Anopheles gambiae | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 ||+|+ ||||| ||+||+||+|| | ||# | Sbjct 805 FEKERMMAKWDTGENPIYKQATTTFKNPTY#AG 836 |
| Anopheles gambiae str. PEST | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 ||+|+ ||||| ||+||+||+|| | ||# | Sbjct 805 FEKERMMAKWDTGENPIYKQATTTFKNPTY#AG 836 |
| Aedes aegypti | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 ||+|+ ||||| ||+||+||+|| | ||# | Sbjct 803 FEKERMMAKWDTGENPIYKQATTTFKNPTY#AG 834 |
| Biomphalaria glabrata | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY# 777 ||+|+ ||||| ||+||+||||| | ||# Sbjct 756 FEKERQNAKWDTGENPIYKQATSTFKNPTY# 785 |
| Crassostrea gigas | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#R 778 ||+| |+||| ||+||+||||| | ||#| Sbjct 768 FEKEAMNARWDTGENPIYKQATSTFVNPTY#R 798 |
| Drosophila melanogaster | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 ||+|+ ||||| ||+||+||||| | |# | Sbjct 814 FEKERMNAKWDTGENPIYKQATSTFKNPMY#AG 845 |
| Tribolium castaneum | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 ||+| |+||| ||+||+||||| | ||# | Sbjct 797 FEKEAMMARWDTGENPIYKQATSTFKNPTY#AG 828 |
| Ovis aries | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#R 778 || |+++||| | ||||+ +|||| |+||#+ Sbjct 744 FEAERSKAKWQTGTNPLYRGSTSTFKNVTY#K 774 |
| Caenorhabditis briggsae | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 | |+ ||||| ||+||+||+|| | |# | Sbjct 776 FNNERLMAKWDTNENPIYKQATTTFKNPVY#AG 807 |
| Caenorhabditis elegans | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 | |+ ||||| ||+||+||+|| | |# | Sbjct 775 FNNERLMAKWDTNENPIYKQATTTFKNPVY#AG 806 |
| Pongo pygmaeus | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#R 778 || |+++ || | ||||+ +|||| |+||#+ Sbjct 672 FEAERSKVKWQTGTNPLYRGSTSTFKNVTY#K 702 |
| Felis catus | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 ||+|| ||||| ||+|| | +| | |# | Sbjct 766 FEKEKMNAKWDTGENPIYKSAVTTVVNPKY#EG 797 |
| Xenopus tropicalis | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 ||+|| ||||| ||+|| | +| | |# | Sbjct 766 FEKEKMNAKWDTGENPIYKSAVTTVVNPKY#EG 797 |
| Ictalurus punctatus | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 ||+|| |||| ||+|| | +| | |# | Sbjct 775 FEKEKMNAKWDAGENPIYKSAVTTVVNPKY#EG 806 |
| Podocoryne carnea | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY# 777 ||+++ |||+ ||+||+||||| | |# Sbjct 749 FEKDRQNPKWDSGENPIYKKATSTFQNPMY# 778 |
| Apis mellifera | Query 748 FEEEKARA-KWDTTHNPLYKEATSTFTNITY#RGN 780 || |+ | ||+ ||||||||||| | |+# | Sbjct 783 FERERILANKWNRRDNPLYKEATSTFKNPTF#NTN 816 |
| Strongylocentrotus purpuratus | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#R 778 ||+|+| | ||+|| +|||| | ||#+ Sbjct 752 FEKERAGTHWGQNENPIYKPSTSTFKNPTY#Q 782 |
| Lytechinus variegatus | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY# 777 ||+|+| | |+ ||+|| +|| | | ||# Sbjct 774 FEKERANATWEGGENPIYKPSTSVFKNPTY# 803 |
| Acropora millepora | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 || |+ +|| ||||+ | +|| | ||# | Sbjct 758 FERERMHSKWTREKNPLYQAAKTTFENPTY#AG 789 |
| Oncorhynchus mykiss | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 || |+ + || |||+ ||+| | |+# | Sbjct 745 FENEQKKGKWSPGDNPLFMNATTTVANPTF#TG 776 |
| Mus sp. | Query 748 FEEEKARAKWDTTHNPLYKEATSTFTNITY#RG 779 ||+|+ + | +||||| | +| | +#+| Sbjct 760 FEKEQQQLNWKQDNNPLYKSAITTTVNPRF#QG 791 |
[Site 2] EFAHFEEEKA753-RAKWDTTHNP
Ala753 Arg
|
|||||||||
| P10 | P9 | P8 | P7 | P6 | P5 | P4 | P3 | P2 | P1 |
|---|---|---|---|---|---|---|---|---|---|
| Glu744 | Phe745 | Ala746 | His747 | Phe748 | Glu749 | Glu750 | Glu751 | Lys752 | Ala753 |
|
|||||||||
| P1' | P2' | P3' | P4' | P5' | P6' | P7' | P8' | P9' | P10' |
| Arg754 | Ala755 | Lys756 | Trp757 | Asp758 | Thr759 | Thr760 | His761 | Asn762 | Pro763 |
Sequence conservation (by blast) Sequence conservation (by blast)
| Reference peptide (cleaved bond±30 residues) |
|---|
| LIGLAALLIWKLLITIHDRREFAHFEEEKARAKWDTTHNPLYKEATSTFTNITYRGNM |
Summary
| # | organism | max score | hits | top seq |
|---|---|---|---|---|
| 1 | Gallus gallus | 114.00 | 7 | integrin, beta 3 precursor |
| 2 | Xenopus laevis | 109.00 | 6 | integrin beta-3 subunit |
| 3 | N/A | 108.00 | 32 | - |
| 4 | Homo sapiens | 108.00 | 25 | integrin beta chain, beta 3 precursor |
| 5 | Pan troglodytes | 108.00 | 15 | PREDICTED: integrin beta chain, beta 3 isoform 4 |
| 6 | Mus musculus | 107.00 | 18 | integrin beta 3 |
| 7 | Macaca mulatta | 107.00 | 13 | PREDICTED: similar to integrin beta chain, beta 3 |
| 8 | Bos taurus | 107.00 | 13 | PREDICTED: similar to platelet glycoprotein IIIa i |
| 9 | Rattus norvegicus | 107.00 | 10 | integrin beta 3 |
| 10 | Canis familiaris | 107.00 | 10 | platelet glycoprotein IIIa |
| 11 | Sus scrofa | 107.00 | 6 | glycoprotein GPIIIa |
| 12 | synthetic construct | 107.00 | 5 | AF239959_1 hybrid integrin beta 3 subunit precurso |
| 13 | rats, Peptide Partial, 723 aa | 107.00 | 1 | beta 3 integrin, GPIIIA |
| 14 | Canis lupus familiaris | 107.00 | 1 | integrin beta chain, beta 3 |
| 15 | Equus caballus | 107.00 | 1 | integrin, beta 3 (platelet glycoprotein IIIa, anti |
| 16 | Danio rerio | 105.00 | 14 | hypothetical protein LOC100001836 |
| 17 | Tetraodon nigroviridis | 105.00 | 8 | unnamed protein product |
| 18 | Monodelphis domestica | 105.00 | 6 | PREDICTED: similar to platelet glycoprotein IIIa |
| 19 | Oryctolagus cuniculus | 105.00 | 2 | glycoprotein IIIa |
| 20 | mice, Peptide Partial, 680 aa | 100.00 | 1 | beta 3 integrin, GPIIIA |
| 21 | Aedes aegypti | 88.60 | 1 | integrin beta subunit |
| 22 | Drosophila melanogaster | 87.00 | 1 | myospheroid CG1560-PA |
| 23 | Ostrinia furnacalis | 86.30 | 1 | integrin beta 1 precursor |
| 24 | Anopheles gambiae | 85.10 | 2 | integrin beta subunit |
| 25 | Anopheles gambiae str. PEST | 85.10 | 1 | ENSANGP00000021373 |
| 26 | Tribolium castaneum | 83.60 | 3 | PREDICTED: similar to CG1560-PA |
| 27 | Pseudoplusia includens | 83.20 | 1 | integrin beta 1 |
| 28 | Pongo pygmaeus | 81.60 | 2 | ITB1_PONPY Integrin beta-1 precursor (Fibronectin |
| 29 | Xenopus tropicalis | 81.60 | 1 | integrin beta 1 (fibronectin receptor beta) |
| 30 | Felis catus | 79.30 | 1 | integrin beta 1 |
| 31 | Ictalurus punctatus | 78.20 | 2 | beta-1 integrin |
| 32 | Biomphalaria glabrata | 78.20 | 1 | beta integrin subunit |
| 33 | Ovis aries | 77.40 | 2 | ITB6_SHEEP Integrin beta-6 precursor emb |
| 34 | Podocoryne carnea | 76.30 | 1 | AF308652_1 integrin beta chain |
| 35 | Crassostrea gigas | 74.30 | 1 | integrin beta cgh |
| 36 | Strongylocentrotus purpuratus | 73.90 | 6 | integrin beta-C subunit |
| 37 | Lytechinus variegatus | 73.90 | 1 | beta-C integrin subunit |
| 38 | Caenorhabditis briggsae | 73.90 | 1 | Hypothetical protein CBG03601 |
| 39 | Caenorhabditis elegans | 73.60 | 1 | Paralysed Arrest at Two-fold family member (pat-3) |
| 40 | Apis mellifera | 65.90 | 1 | PREDICTED: similar to myospheroid CG1560-PA |
| 41 | Pacifastacus leniusculus | 62.40 | 1 | integrin |
| 42 | Manduca sexta | 62.40 | 1 | plasmatocyte-specific integrin beta 1 |
| 43 | Halocynthia roretzi | 58.20 | 2 | integrin beta Hr2 precursor |
| 44 | Spodoptera frugiperda | 55.80 | 1 | integrin beta 1 |
| 45 | Sigmodon hispidus | 54.70 | 1 | AF445415_1 integrin beta-2 precursor |
| 46 | Schistosoma japonicum | 53.90 | 1 | SJCHGC06221 protein |
| 47 | Mus sp. | 53.50 | 1 | beta 7 integrin |
| 48 | Acropora millepora | 53.10 | 1 | integrin subunit betaCn1 |
| 49 | Oncorhynchus mykiss | 53.10 | 1 | CD18 protein |
| 50 | Capra hircus | 51.60 | 1 | ITB2_CAPHI Integrin beta-2 precursor (Cell surface |
| 51 | Bubalus bubalis | 51.60 | 1 | integrin beta-2 |
| 52 | Ovis canadensis | 50.80 | 1 | ITB2_OVICA Integrin beta-2 precursor (Cell surface |
| 53 | Geodia cydonium | 45.10 | 1 | integrin beta subunit |
| 54 | Cyprinus carpio | 43.50 | 2 | CD18 type 2 |
| 55 | Suberites domuncula | 42.40 | 1 | integrin beta subunit |
| 56 | Ophlitaspongia tenuis | 40.40 | 1 | integrin subunit betaPo1 |
| 57 | Drosophila pseudoobscura | 34.30 | 1 | GA14581-PA |
Top-ranked sequences
| organism | matching |
|---|---|
| Gallus gallus | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRGNM 781 ||||||||||||||||||||||| ||||||#|||||| +|||||||||||||||||||| Sbjct 724 LIGLAALLIWKLLITIHDRREFARFEEEKA#RAKWDTGNNPLYKEATSTFTNITYRGNM 781 |
| Xenopus laevis | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRGN 780 |||| |||||||||||||||||| ||||+|#+||||| |||||| ||||||||||||| Sbjct 730 LIGLVALLIWKLLITIHDRREFAKFEEERA#KAKWDTAHNPLYKGATSTFTNITYRGN 786 |
| N/A | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 |||||||||||||||||||+||| ||||+|#|||||| +|||||||||||||||||| Sbjct 732 LIGLAALLIWKLLITIHDRKEFAKFEEERA#RAKWDTANNPLYKEATSTFTNITYRG 787 |
| Homo sapiens | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 |||||||||||||||||||+||| ||||+|#|||||| +|||||||||||||||||| Sbjct 732 LIGLAALLIWKLLITIHDRKEFAKFEEERA#RAKWDTANNPLYKEATSTFTNITYRG 787 |
| Pan troglodytes | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 |||||||||||||||||||+||| ||||+|#|||||| +|||||||||||||||||| Sbjct 732 LIGLAALLIWKLLITIHDRKEFAKFEEERA#RAKWDTANNPLYKEATSTFTNITYRG 787 |
| Mus musculus | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 ||||| |||||||||||||+||| ||||+|#|||||| +|||||||||||||||||| Sbjct 731 LIGLATLLIWKLLITIHDRKEFAKFEEERA#RAKWDTANNPLYKEATSTFTNITYRG 786 |
| Macaca mulatta | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 ||||| |||||||||||||+||| ||||+|#|||||| +|||||||||||||||||| Sbjct 732 LIGLATLLIWKLLITIHDRKEFAKFEEERA#RAKWDTANNPLYKEATSTFTNITYRG 787 |
| Bos taurus | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 ||||| |||||||||||||+||| ||||+|#|||||| +|||||||||||||||||| Sbjct 728 LIGLATLLIWKLLITIHDRKEFAKFEEERA#RAKWDTANNPLYKEATSTFTNITYRG 783 |
| Rattus norvegicus | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 ||||| |||||||||||||+||| ||||+|#|||||| +|||||||||||||||||| Sbjct 731 LIGLATLLIWKLLITIHDRKEFAKFEEERA#RAKWDTANNPLYKEATSTFTNITYRG 786 |
| Canis familiaris | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 ||||| |||||||||||||+||| ||||+|#|||||| +|||||||||||||||||| Sbjct 728 LIGLATLLIWKLLITIHDRKEFAKFEEERA#RAKWDTANNPLYKEATSTFTNITYRG 783 |
| Sus scrofa | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 ||||| |||||||||||||+||| ||||+|#|||||| +|||||||||||||||||| Sbjct 728 LIGLATLLIWKLLITIHDRKEFAKFEEERA#RAKWDTANNPLYKEATSTFTNITYRG 783 |
| synthetic construct | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 ||||| |||||||||||||+||| ||||+|#|||||| +|||||||||||||||||| Sbjct 732 LIGLATLLIWKLLITIHDRKEFAKFEEERA#RAKWDTANNPLYKEATSTFTNITYRG 787 |
| rats, Peptide Partial, 723 aa | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 ||||| |||||||||||||+||| ||||+|#|||||| +|||||||||||||||||| Sbjct 667 LIGLATLLIWKLLITIHDRKEFAKFEEERA#RAKWDTANNPLYKEATSTFTNITYRG 722 |
| Canis lupus familiaris | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 ||||| |||||||||||||+||| ||||+|#|||||| +|||||||||||||||||| Sbjct 728 LIGLATLLIWKLLITIHDRKEFAKFEEERA#RAKWDTANNPLYKEATSTFTNITYRG 783 |
| Equus caballus | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 ||||| |||||||||||||+||| ||||+|#|||||| +|||||||||||||||||| Sbjct 728 LIGLATLLIWKLLITIHDRKEFAKFEEERA#RAKWDTANNPLYKEATSTFTNITYRG 783 |
| Danio rerio | Query 725 IGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 +||||||||||||||||||||| ||||+|#||||+| |||||| |||||||||||| Sbjct 734 LGLAALLIWKLLITIHDRREFAKFEEERA#RAKWETGHNPLYKGATSTFTNITYRG 788 |
| Tetraodon nigroviridis | Query 725 IGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 +||||||||||||||||||||| ||||+|#|||||| |||||| |||||||||+|| Sbjct 748 LGLAALLIWKLLITIHDRREFAKFEEERA#RAKWDTGHNPLYKGATSTFTNITFRG 802 |
| Monodelphis domestica | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYR 778 ||||| ||||||||||||||||| ||||+|#|||||| +||||||||||||||||| Sbjct 707 LIGLATLLIWKLLITIHDRREFAKFEEERA#RAKWDTANNPLYKEATSTFTNITYR 761 |
| Oryctolagus cuniculus | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 ||| | |||||||||||||+||| ||||+|#|||||| +|||||||||||||||||| Sbjct 732 LIGFALLLIWKLLITIHDRKEFAKFEEERA#RAKWDTANNPLYKEATSTFTNITYRG 787 |
| mice, Peptide Partial, 680 aa | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNIT 776 ||||| |||||||||||||+||| ||||+|#|||||| +||||||||||||||| Sbjct 628 LIGLATLLIWKLLITIHDRKEFAKFEEERA#RAKWDTANNPLYKEATSTFTNIT 680 |
| Aedes aegypti | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 ||||| ||+|||| ||||||||| ||+|+ # ||||| ||+||+||+|| | || | Sbjct 779 LIGLAVLLLWKLLTTIHDRREFARFEKERM#MAKWDTGENPIYKQATTTFKNPTYAG 834 |
| Drosophila melanogaster | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 |+||| ||+|||| ||||||||| ||+|+ # ||||| ||+||+||||| | | | Sbjct 790 LVGLAILLLWKLLTTIHDRREFARFEKERM#NAKWDTGENPIYKQATSTFKNPMYAG 845 |
| Ostrinia furnacalis | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 |+||| |++||++ ||||||||| ||+|+ # ||||| ||+||+||||| | || | Sbjct 775 LVGLALLMLWKMVTTIHDRREFARFEKERM#MAKWDTGENPIYKQATSTFKNPTYAG 830 |
| Anopheles gambiae | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 |||+| ||+||+| +|||||||| ||+|+ # ||||| ||+||+||+|| | || | Sbjct 781 LIGMAVLLLWKVLTSIHDRREFARFEKERM#MAKWDTGENPIYKQATTTFKNPTYAG 836 |
| Anopheles gambiae str. PEST | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 |||+| ||+||+| +|||||||| ||+|+ # ||||| ||+||+||+|| | || | Sbjct 781 LIGMAVLLLWKVLTSIHDRREFARFEKERM#MAKWDTGENPIYKQATTTFKNPTYAG 836 |
| Tribolium castaneum | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 |+|+| ||+||| ||||||||| ||+| # |+||| ||+||+||||| | || | Sbjct 773 LLGMAILLLWKLFTTIHDRREFAKFEKEAM#MARWDTGENPIYKQATSTFKNPTYAG 828 |
| Pseudoplusia includens | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 |+||| |++||+ | ||||||| ||+|+ # ||||| ||+||+||||| | || | Sbjct 781 LVGLALLMLWKMATTSHDRREFARFEKERM#MAKWDTGENPIYKQATSTFKNPTYAG 836 |
| Pongo pygmaeus | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 ||||| |||||||+ |||||||| ||+|| # ||||| ||+|| | +| | | | Sbjct 742 LIGLALLLIWKLLMIIHDRREFAKFEKEKM#NAKWDTGENPIYKSAVTTVVNPKYEG 797 |
| Xenopus tropicalis | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 ||||| |||||||+ |||||||| ||+|| # ||||| ||+|| | +| | | | Sbjct 742 LIGLALLLIWKLLMIIHDRREFAKFEKEKM#NAKWDTGENPIYKSAVTTVVNPKYEG 797 |
| Felis catus | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 ||||| |||||||+ ||| |||| ||+|| # ||||| ||+|| | +| | | | Sbjct 742 LIGLALLLIWKLLMIIHDTREFAKFEKEKM#NAKWDTGENPIYKSAVTTVVNPKYEG 797 |
| Ictalurus punctatus | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 ||||| | |||||+ |||||||| ||+|| # |||| ||+|| | +| | | | Sbjct 751 LIGLALLFIWKLLMIIHDRREFAKFEKEKM#NAKWDAGENPIYKSAVTTVVNPKYEG 806 |
| Biomphalaria glabrata | Query 725 IGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITY 777 +|| ||+|||| ||| |||| ||+|+ # ||||| ||+||+||||| | || Sbjct 733 VGLFLLLLWKLLTFIHDTREFAKFEKERQ#NAKWDTGENPIYKQATSTFKNPTY 785 |
| Ovis aries | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYR 778 |||+| | |||||++ |||+| | || |++#+||| | ||||+ +|||| |+||+ Sbjct 720 LIGVALLCIWKLLVSFHDRKEVAKFEAERS#KAKWQTGTNPLYRGSTSTFKNVTYK 774 |
| Podocoryne carnea | Query 725 IGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITY 777 |||| ||||||| || |||||| ||+++ # |||+ ||+||+||||| | | Sbjct 726 IGLALLLIWKLLATIQDRREFAKFEKDRQ#NPKWDSGENPIYKKATSTFQNPMY 778 |
| Crassostrea gigas | Query 726 GLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYR 778 |+ |||||| || |+|| | ||+| # |+||| ||+||+||||| | ||| Sbjct 746 GIILLLIWKLFTTISDKRELARFEKEAM#NARWDTGENPIYKQATSTFVNPTYR 798 |
| Strongylocentrotus purpuratus | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITY 777 |+||| ||||+|| ||||||| +||+|+|# | |+ ||+|| +|| | | || Sbjct 750 LVGLALLLIWRLLTYIHDRREFQNFEKERA#NATWEGGENPIYKPSTSVFKNPTY 803 |
| Lytechinus variegatus | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITY 777 |+||| ||||+|| ||||||| +||+|+|# | |+ ||+|| +|| | | || Sbjct 750 LVGLALLLIWRLLTYIHDRREFQNFEKERA#NATWEGGENPIYKPSTSVFKNPTY 803 |
| Caenorhabditis briggsae | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 ++|+ ||+|||| +||| |+| | |+ # ||||| ||+||+||+|| | | | Sbjct 752 ILGILLLLLWKLLTVLHDRAEYAKFNNERL#MAKWDTNENPIYKQATTTFKNPVYAG 807 |
| Caenorhabditis elegans | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 ++|+ ||+|||| +||| |+| | |+ # ||||| ||+||+||+|| | | | Sbjct 751 ILGILLLLLWKLLTVLHDRSEYATFNNERL#MAKWDTNENPIYKQATTTFKNPVYAG 806 |
| Apis mellifera | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RA-KWDTTHNPLYKEATSTFTNITYRGN 780 +|| | || ||+| | | ||| || |+ # | ||+ ||||||||||| | |+ | Sbjct 759 IIGFAILLTWKILTMIRDNREFKKFERERI#LANKWNRRDNPLYKEATSTFKNPTFNTN 816 |
| Pacifastacus leniusculus | Query 725 IGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTN 774 ||| ||||||| |+|||||+| ||+|+ # ||||| | +|| | Sbjct 745 IGLLTLLIWKLLTTLHDRREYAKFEKERK#LPSGKRAENPLYKSAKTTFQN 794 |
| Manduca sexta | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRGN 780 |||| |+ ||+|+ +||+||+| |||| # +| + ||||+| |+| | | Sbjct 708 LIGLLTLIAWKILVDLHDKREYAKFEEESR#SRGFDVSLNPLYQEPEINFSNPVYNAN 764 |
| Halocynthia roretzi | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRGN 780 |||+ ||+|||++ |+ |+||+ |++|+ # || ||+| |+| | | + || Sbjct 778 LIGIIALIIWKVIQTLRDKREYEKFKKEED#LRKWTKGENPVYVNASSKFDNPMFGGN 834 |
| Spodoptera frugiperda | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITY 777 |||+ ++|||+|+ +||++|+ |++| # | +| + ||||++ + |+| | Sbjct 723 LIGILTVIIWKILVDMHDKKEYKKFQDEAL#AAGYDVSLNPLYQDPSINFSNPVY 776 |
| Sigmodon hispidus | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTN 774 |||+ |+||| | + | ||+ |||+|| #+++|+ |||+| ||+| | Sbjct 714 LIGVLLLVIWKALTHLTDLREYRHFEKEKL#KSQWN-NDNPLFKSATTTVMN 763 |
| Schistosoma japonicum | Query 726 GLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRGN 780 || |||+||+||| |||| |+|+++ # +|+ ||+++ |+ | |+ | Sbjct 232 GLILLLIYKLVITIDDRRELANFKQQGE#NMRWEMAENPIFESPTTNVLNPTFEEN 286 |
| Mus sp. | Query 725 IGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 +|| +| ++| + |+||||+ ||+|+ #+ | +||||| | +| | ++| Sbjct 737 VGLGLVLAYRLSVEIYDRREYRRFEKEQQ#QLNWKQDNNPLYKSAITTTVNPRFQG 791 |
| Acropora millepora | Query 725 IGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 +|| |++ | | |+ || |+ || |+ # +|| ||||+ | +|| | || | Sbjct 735 LGLLILIVIKGLFTMVDRIEYQKFERERM#HSKWTREKNPLYQAAKTTFENPTYAG 789 |
| Oncorhynchus mykiss | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRG 779 |||| ||| | ++ + | +|| || |+ #+ || |||+ ||+| | |+ | Sbjct 721 LIGLLILLIIKAILYMRDVKEFRRFENEQK#KGKWSPGDNPLFMNATTTVANPTFTG 776 |
| Capra hircus | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTN 774 |+|+ |+||| | + | ||+ ||+|| #+++|+ |||+| ||+| | Sbjct 715 LVGILLLVIWKALTHLSDLREYHRFEKEKL#KSQWN-NDNPLFKSATTTVMN 764 |
| Bubalus bubalis | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTN 774 |+|+ |+||| | + | ||+ ||+|| #+++|+ |||+| ||+| | Sbjct 714 LVGILLLVIWKALTHLSDLREYHRFEKEKL#KSQWN-NDNPLFKSATTTVMN 763 |
| Ovis canadensis | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTN 774 |+|+ | ||| | + | ||+ ||+|| #+++|+ |||+| ||+| | Sbjct 715 LVGILLLAIWKALTHLSDLREYHRFEKEKL#KSQWN-NDNPLFKSATTTVMN 764 |
| Geodia cydonium | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITY 777 |+|+ ||++ |+|+ + | | || | |#+ |+ |||| ||+ | | Sbjct 823 LLGILALILLKILLMVLDYTELKKFENELA#KVKYTKNENPLYHSATTEHKNPIY 876 |
| Cyprinus carpio | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITYRGN 780 |||| ||| | ++ | ||+ ||+++ # | | |||++ ||+| | |+ |+ Sbjct 711 LIGLLILLIIKAVLYASDLREWKRFEKDRK#HEKTSGT-NPLFQNATTTVQNPTFSGD 766 |
| Suberites domuncula | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITY 777 ++|+ |||+ || + | | | ||+| |#+ |+ ||||+ | + | | Sbjct 709 ILGVIALLLLKLFLFIIDVIEVKKFEKELA#KTKYPKHQNPLYRSAAKDYQNPIY 762 |
| Ophlitaspongia tenuis | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTFTNITY 777 ++|| ||+ | |+ + | | || | # ||+ ||||+ || + | | Sbjct 783 VLGLLLLLLLKGLLLLWDVVEVRKFEREIK#NAKYTKNENPLYRSATKDYQNPLY 836 |
| Drosophila pseudoobscura | Query 724 LIGLAALLIWKLLITIHDRREFAHFEEEKA#RAKWDTTHNPLYKEATSTF 772 |||| + ++ | | ||+| |||| #+|| + ||||++ + Sbjct 709 LIGLLLIFLFIWCIRRKDAREYARFEEE--#QAKRVSQENPLYRDPVGRY 755 |
* References
None.