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XSB2958 : PREDICTED: phosphodiesterase 1A, calmodulin-dependent [Equus caballus]

[ CaMP Format ]

This entry is computationally expanded from SB0004

* Basic Information

OrganismEquus caballus (horse)
Protein Namesphosphodiesterase 1A; calmodulin-dependent
Gene NamesPDE1A; The sequence of the transcript was modified to prevent a premature stop codon represented in this assembly; Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
XP_001917533 XM_001917498 100054082 N/A N/A N/A N/A N/A

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 545 aa

Average Mass: 0.000 kDa

Monoisotopic Mass: 0.000 kDa

2. Domain Information

Annotated Domains: Not Available.

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
L27_N 1. 2368-11.27.3
PDEase_I_N 1. 73133121.33.1e-33
--- cleavage 126 (inside PDEase_I_N 73..133) ---
PDEase_I 1. 218449507.91.3e-149

3. Sequence Information

Fasta Sequence: XSB2958.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)

[Site 1] KFRSIVHAVQ126-AGIFVERMYR

Gln126 Ala

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Lys117Phe118Arg119Ser120Ile121Val122His123Ala124Val125Gln126
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Ala127Gly128Ile129Phe130Val131Glu132Arg133Met134Tyr135Arg136

Sequence conservation (by blast)

* References

None.